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    Two-dimensional quantum simulation of scaling effects in ultrathin body MOSFET structure: NEGF approach

    , Article 14th International Workshop on the Physics of Semiconductor Devices, IWPSD, Mumbai, 16 December 2007 through 20 December 2007 ; 2007 , Pages 240-242 ; 9781424417285 (ISBN) Orouji, A.A ; Dehdashti, N ; Faez, R ; Sharif University of Technology
    2007
    Abstract
    For the first time, we present self-consistent solution of ultrathin body device structures to investigate the device parameters variation on the characteristics of nanoscale MOSFET. Our two dimensional (2-D) device simulator Is based on Nonequlibrium Green's Function (NEGF) forma lism. Starting from a basic structure (DG-MOSFET) with a gate length of 10 nm, variation of gate length, channel thickness, gate oxide parameters was carried out in connection with the numerical calculation of device characteristics. In this work Quantum transport equations are solved in 2-D by NEGF method in active area of the device to obtain the charge density and Poisson's equation is solved in entire domain of... 

    A distributed topology control algorithm for P2P based simulations

    , Article 11th IEEE International Symposium on Distributed Simulation and Real-Time Applications, DS-RT 2007, Chania, 22 October 2007 through 24 October 2007 ; November , 2007 , Pages 68-71 ; 15506525 (ISSN); 0769530117 (ISBN); 9780769530116 (ISBN) Hariri, B ; Shirmohammadi, S ; Pakravan, M. R ; Sharif University of Technology
    2007
    Abstract
    Although collaborative distributed simulations and virtual environments (VE) have been an active area of research in the past few years, they have recently gained even more attention due to the emergence of online gaming, emergency simulation and planning systems, and disaster management applications. Such environments combine graphics, haptics, animations and networking to create interactive multimodal worlds that allows participants to collaborate in real-time. Massively Multiplayer Online Gaming (MMOG), perhaps the most widely deployed practical application of distributed virtual environments, allows players to act together concurrently in a virtual world over the Internet. IP... 

    Homozygous mutations in C14orf39/SIX6OS1 cause non-obstructive azoospermia and premature ovarian insufficiency in humans

    , Article American Journal of Human Genetics ; Volume 108, Issue 2 , 2021 , Pages 324-336 ; 00029297 (ISSN) Fan, S ; Jiao, Y ; Khan, R ; Jiang, X ; Javed, A. R ; Ali, A ; Zhang, H ; Zhou, J ; Naeem, M ; Murtaza, G ; Li, Y ; Yang, G ; Zaman, Q ; Zubair, M ; Guan, H ; Zhang, X ; Ma, H ; Jiang, H ; Ali, H ; Dil, S ; Shah, W ; Ahmad, N ; Zhang, Y ; Shi, Q ; Sharif University of Technology
    Cell Press  2021
    Abstract
    Human infertility is a multifactorial disease that affects 8%–12% of reproductive-aged couples worldwide. However, the genetic causes of human infertility are still poorly understood. Synaptonemal complex (SC) is a conserved tripartite structure that holds homologous chromosomes together and plays an indispensable role in the meiotic progression. Here, we identified three homozygous mutations in the SC coding gene C14orf39/SIX6OS1 in infertile individuals from different ethnic populations by whole-exome sequencing (WES). These mutations include a frameshift mutation (c.204_205del [p.His68Glnfs∗2]) from a consanguineous Pakistani family with two males suffering from non-obstructive... 

    Fe3O4@PAA@UiO-66-NH2 magnetic nanocomposite for selective adsorption of Quercetin

    , Article Chemosphere ; Volume 275 , 2021 ; 00456535 (ISSN) Ahmadijokani, F ; Tajahmadi, S ; Haris, M. H ; Bahi, A ; Rezakazemi, M ; Molavi, H ; Ko, F ; Arjmand, M ; Sharif University of Technology
    Elsevier Ltd  2021
    Abstract
    In the present study, a magnetic core-shell metal-organic framework (Fe3O4@PAA@UiO-66-NH2) nanocomposite was synthesized by a facile step-by-step self-assembly technique and used for selective adsorption of the anti-cancer Quercetin (QCT) drug. The synthesized nanocomposite was well characterized using FTIR, XRD, BET, FESEM, and TEM techniques. The adsorption kinetics and isotherms of the magnetic nanocomposites for QCT were investigated in detail at different initial concentrations and temperatures. It was found that the experimental adsorption kinetic and isotherm data were precisely explained by the pseudo-second-order kinetic and Langmuir isotherm models. Moreover, the selective... 

    Fe3O4@PAA@UiO-66-NH2 magnetic nanocomposite for selective adsorption of Quercetin

    , Article Chemosphere ; Volume 275 , 2021 ; 00456535 (ISSN) Ahmadijokani, F ; Tajahmadi, S ; Haris, M. H ; Bahi, A ; Rezakazemi, M ; Molavi, H ; Ko, F ; Arjmand, M ; Sharif University of Technology
    Elsevier Ltd  2021
    Abstract
    In the present study, a magnetic core-shell metal-organic framework (Fe3O4@PAA@UiO-66-NH2) nanocomposite was synthesized by a facile step-by-step self-assembly technique and used for selective adsorption of the anti-cancer Quercetin (QCT) drug. The synthesized nanocomposite was well characterized using FTIR, XRD, BET, FESEM, and TEM techniques. The adsorption kinetics and isotherms of the magnetic nanocomposites for QCT were investigated in detail at different initial concentrations and temperatures. It was found that the experimental adsorption kinetic and isotherm data were precisely explained by the pseudo-second-order kinetic and Langmuir isotherm models. Moreover, the selective... 

    Modeling and optimization of respiratory-gated partial breast irradiation with proton beams - A Monte Carlo study

    , Article Computers in Biology and Medicine ; Volume 147 , 2022 ; 00104825 (ISSN) Piruzan, E ; Vosoughi, N ; Mahani, H ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    The selection of a suitable duty factor (DF) remains a major challenge in respiratory-gated treatments. Therefore, this study aims at presenting a new methodology for fast optimizing the gating window width (duty factor (DF)) in respiratory-gated proton partial breast irradiation (PBI). To do so, GATE Monte Carlo simulations were performed for various target sizes and locations in supine and prone positions. Three different duty factors of 20, 25, and 33% were considered. Sparing factors (SF) for four organs-at-risk (OARs) were then assessed. The weighted-sum method was employed to search for an optimal DF. The results indicate that an SF higher than unity was obtained for all plans. The SF... 

    Significant pathological voice discrimination by computing posterior distribution of balanced accuracy

    , Article Biomedical Signal Processing and Control ; Volume 73 , 2022 ; 17468094 (ISSN) Pakravan, M ; Jahed, M ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    The ability to speak lucidly plays a key role in social relations. Consequently, the role of the larynx is quite important, and timely diagnosis of laryngeal diseases has proved to be crucial. In this study, a simple computational model for inverse of speech production model is employed to extract the glottal waveform using speech signal. This waveform has useful information about vocal folds performance in terms of providing evidence for distinguishing pathological disorders. Furthermore, obtaining the significance of classification results is important, because it leads to reliable inferences. This study utilizes the sustained vowel sound /a/ and a well-referenced database, namely MEEI. In... 

    A theoretical investigation into the effects of functionalized graphene nanosheets on dimethyl sulfoxide separation

    , Article Chemosphere ; Volume 297 , 2022 ; 00456535 (ISSN) Ajalli, N ; Alizadeh, M ; Hasanzadeh, A ; Khataee, A ; Azamat, J ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    The potential of carbon-based nanosheet membranes with functionalized pores is great as water treatment membranes. Using the molecular dynamic simulation technique, the dimethyl sulfoxide (DMSO) separation from the water/DMSO binary solution is investigated, and the functionalized graphene nanosheets are used as a membrane. This membrane was functionalized by –F (fluorine) and –H (hydrogen) functional groups. For the separation of DMSO, external hydrostatic pressures up to 100 MPa were applied to the considered systems. The separation mechanism was based on molecular size. Multiple analyses were done to study the capability of considered membranes for the separation of DMSO molecules from... 

    Simvastatin-loaded nano-niosomes confer cardioprotection against myocardial ischemia/reperfusion injury

    , Article Drug Delivery and Translational Research ; Volume 12, Issue 6 , 2022 , Pages 1423-1432 ; 2190393X (ISSN) Naseroleslami, M ; Mousavi Niri , N ; Akbarzade, I ; Sharifi, M ; Aboutaleb, N ; Sharif University of Technology
    Springer  2022
    Abstract
    Although simvastatin (SIM) has been proven to be a powerful agent against myocardial ischemia/reperfusion (MI/R) injury, poor water solubility, short half-life, and low bioavailability have made it futile while using conventional drug delivery system. Hence, this study aims to investigate therapeutic efficacy of SIM-loaded nano-niosomes on MI/R injury. Surface active agent film hydration method was used to synthesize nano-niosomes. The physicochemical properties of nano-niosomes were characterized using dynamic light scattering (DLS) and transmission electron microscopy (TEM). Moreover, niosomes were characterized in entrapment efficiency (EE) and releasing pattern. Male Wistar rats were... 

    Thermo- and pH-sensitive dendrosomes as bi-phase drug delivery systems

    , Article Nanomedicine: Nanotechnology, Biology, and Medicine ; Volume 9, Issue 8 , 2013 , Pages 1203-1213 ; 15499634 (ISSN) Adeli, M ; Fard, A. K ; Abedi, F ; Chegeni, B. K ; Bani, F ; Sharif University of Technology
    2013
    Abstract
    Fully supramolecular dendrosomes (FSD) as bi-phase drug delivery systems are reported in this work. For preparation of FSD, amphiphilic linear-dendritic supramolecular systems (ALDSS) have been synthesized by host-guest interactions between hyperbranched polyglycerol having β-cyclodextrin core and bi-chain polycaprolactone (BPCL) with a fluorescine focal point. Self-assembly of ALDSS in aqueous solutions led to FSD. They were able to encapsulate paclitaxel with a high loading capacity. The dendrosome-based drug delivery systems were highly sensitive to pH and temperature. They were stable at 20-37. °C and pH7-8, but dissociated and released drug at temperatures lower than 20. °C or higher... 

    Aniline-silica nanocomposite as a novel solid phase microextraction fiber coating

    , Article Journal of Chromatography A ; Volume 1238 , May , 2012 , Pages 22-29 ; 00219673 (ISSN) Bagheri, H ; Roostaie, A ; Sharif University of Technology
    2012
    Abstract
    A new unbreakable solid phase microextraction (SPME) fiber coating based on aniline-silica nanocomposite was electrodeposited on a stainless steel wire. The electropolymerization process was carried out at a constant deposition potential, applied to the corresponding aqueous electrolyte containing aniline and silica nanoparticles. The scanning electron microscopy (SEM) images showed the non-smooth and the porous surface structure of the prepared nanocomposite. The applicability of the new fiber coating was examined by headspace-solid phase microextraction (HS-SPME) of some environmentally important polycyclic aromatic hydrocarbons (PAHs), as model compounds, from aqueous samples.... 

    A multiscale phase field method for joint segmentation-rigid registration application to motion estimation of human knee joint

    , Article Biomedical Engineering - Applications, Basis and Communications ; Volume 23, Issue 6 , 2011 , Pages 445-456 ; 10162372 (ISSN) Eslami, A ; Esfandiarpour, F ; Shakourirad, A ; Farahmand, F ; Sharif University of Technology
    2011
    Abstract
    Image based registration of rigid objects has been frequently addressed in the literature to obtain an object's motion parameters. In this paper, a new approach of joint segmentation-rigid registration, within the variational framework of the phase field approximation of the Mumford-Shah's functional, is proposed. The defined functional consists of two Mumford-Shah equations, extracting the discontinuity set of the reference and target images due to a rigid spatial transformation. Multiscale minimization of the proposed functional after finite element discretization provided a sub-pixel, robust algorithm for edge extraction as well as edge based rigid registration. The implementation... 

    An unbreakable on-line approach towards sol-gel capillary microextraction

    , Article Journal of Chromatography A ; Volume 1218, Issue 26 , 2011 , Pages 3952-3957 ; 00219673 (ISSN) Bagheri, H ; Piri-Moghadam, H ; Es'haghi, A ; Sharif University of Technology
    2011
    Abstract
    In this work a novel unbreakable sol-gel-based in-tube device for on-line solid phase microextraction (SPME) was developed. The inner surface of a copper tube, intended to be used as a high performance liquid chromatography (HPLC) loop, was electrodeposited by metallic Cu followed by the self assembled monolayers (SAM) of 3-(mercaptopropyl) trimethoxysilane (3MPTMOS). Then, poly (ethyleneglycol) (PEG) was chemically bonded to the -OH sites of the SAM already covering the inner surface of the copper loop using sol-gel technology. The homogeneity and the porous surface structure of the SAM and sol-gel coatings were examined using the scanning electron microscopy (SEM) and adsorption/desorption... 

    Design and evaluation of a novel triaxial isometric trunk muscle strength measurement system

    , Article Proceedings of the Institution of Mechanical Engineers, Part H: Journal of Engineering in Medicine ; Volume 223, Issue 6 , 2009 , Pages 755-766 ; 09544119 (ISSN) Azghani, M. R ; Farahmand, F ; Meghdari, A ; Vossoughi, G ; Parnianpour, M ; Sharif University of Technology
    2009
    Abstract
    Maximal strength measurements of the trunk have been used to evaluate the maximum functional capacity of muscles and the potential mechanical overload or overuse of the lumbar spine tissues in order to estimate the risk of developing musculoskeletal injuries. A new triaxial isometric trunk strength measurement system was designed and developed in the present study, and its reliability and performance was investigated. The system consisted of three main revolute joints, equipped with torque sensors, which intersect at L5-S1 and adjustment facilities to fit the body anthropometry and to accommodate both symmetric and asymmetric postures in both seated and standing positions. The dynamics of... 

    Effective factors in the treatment of kerosene-water emulsion by using UF membranes

    , Article Journal of Hazardous Materials ; Volume 161, Issue 2-3 , 2009 , Pages 1216-1224 ; 03043894 (ISSN) Rezvanpour, A ; Roostaazad, R ; Hesampour, M ; Nyström, M ; Ghotbi, C ; Sharif University of Technology
    2009
    Abstract
    The effects of different parameters including membrane type (regenerated cellulose and polysulphone), transmembrane pressure (TMP), the content of oil in the feed, the flow velocity of the feed and pH on the ultrafiltration of an emulsion of kerosene in water were studied. It was found that the important factors affecting ultrafiltration were, in order, membrane type, pressure and oil concentration. The greatest flux at the optimum conditions here of 3 bar, an oil content of 3% (v/v) and with membrane type C30F was predicted as 108 L/(m2 h) that was within the range of the confidence limit of the measured value of 106 L/(m2 h). The normalised FTIR results of the virgin cellulosic membranes... 

    A foreign body response-on-a-chip platform

    , Article Advanced Healthcare Materials ; Volume 8, Issue 4 , 2019 ; 21922640 (ISSN) Sharifi, F ; Htwe, S. S ; Righi, M ; Liu, H ; Pietralunga, A ; Yesil Celiktas, O ; Maharjan, S ; Cha, B. H ; Shin, S. R ; Dokmeci, M. R ; Vrana, N. E ; Ghaemmaghami, A. M ; Khademhosseini, A ; Zhang, Y. S ; Sharif University of Technology
    Wiley-VCH Verlag  2019
    Abstract
    Understanding the foreign body response (FBR) and desiging strategies to modulate such a response represent a grand challenge for implant devices and biomaterials. Here, the development of a microfluidic platform is reported, i.e., the FBR-on-a-chip (FBROC) for modeling the cascade of events during immune cell response to implants. The platform models the native implant microenvironment where the implants are interfaced directly with surrounding tissues, as well as vasculature with circulating immune cells. The study demonstrates that the release of cytokines such as monocyte chemoattractant protein 1 (MCP-1) from the extracellular matrix (ECM)-like hydrogels in the bottom tissue chamber... 

    Examination of chondroitinase ABC I immobilization onto dextran-coated Fe3O4 nanoparticles and its in-vitro release

    , Article Journal of Biotechnology ; Volume 309 , 2020 , Pages 131-141 Askaripour, H ; Vossoughi, M ; Khajeh, K ; Alemzadeh, I ; Sharif University of Technology
    Elsevier B.V  2020
    Abstract
    Chondroitinase ABC I (cABC I) has received notable attention in treatment of spinal cord injuries and its application as therapeutics has been limited due to low thermal stability at physiological temperature. In this study, cABC I enzyme was immobilized on the dextran-coated Fe3O4 nanoparticles through physical adsorption to improve the thermal stability. The nanoparticles were characterized using XRD, SEM, VSM, and FTIR analyses. Response surface methodology and central composite design were employed to assess factors affecting the activity of immobilized cABC I. Experimental results showed that pH 6.3, temperature 24 °C, enzyme/support mass ratio 1.27, and incubation time 5.7 h were the... 

    The metabolome profiling of obese and non-obese individuals: Metabolically healthy obese and unhealthy non-obese paradox

    , Article Iranian Journal of Basic Medical Sciences ; Volume 23, Issue 2 , 2020 , Pages 186-194 Chashmniam, S ; Madani, N. H ; Ghoochani, B. F. N. M ; Safari Alighiarloo, N ; Khamseh, M. E ; Sharif University of Technology
    Mashhad University of Medical Sciences  2020
    Abstract
    Objective(s): The molecular basis of “metabolically healthy obese” and “metabolically unhealthy non-obese” phenotypes is not fully understood. Our objective was to identify metabolite patterns differing in obese (metabolically healthy vs unhealthy (MHO vs MUHO)) and non-obese (metabolically healthy vs unhealthy (MHNO vs MUHNO)) individuals. Materials and Methods: This case-control study was performed on 86 subjects stratified into four groups using anthropometric and clinical measurements: MHO (21), MUHO (21), MHNO (22), and MUHNO (22). Serum metabolites were profiled using nuclear magnetic resonance (NMR). Multivariate analysis was applied to uncover discriminant metabolites, and enrichment... 

    Injectable in situ forming kartogenin-loaded chitosan hydrogel with tunable rheological properties for cartilage tissue engineering

    , Article Colloids and Surfaces B: Biointerfaces ; Volume 192 , 2020 Dehghan-Baniani, D ; Chen, Y ; Wang, D ; Bagheri, R ; Solouk, A ; Wu, H ; Sharif University of Technology
    Elsevier B.V  2020
    Abstract
    Limited regeneration capacity of cartilage can be addressed by tissue engineering approaches including localized delivery of bioactive agents using biomaterials. Although chitosan hydrogels have been considered as appropriate candidates for these purposes, however, their poor mechanical properties limit their real applications. Here, we develop in situ forming chitosan hydrogels with enhanced shear modulus by chemical modification of chitosan using N-(β-maleimidopropyloxy) succinimide ester (BMPS). Moreover, we utilize β-Glycerophosphate (β-GP) in the hydrogels for achieving thermosensitivity. We investigate the effects of BMPS, β-GP and chitosan concentration on rheological and swelling... 

    Ultrafast and simultaneous removal of anionic and cationic dyes by nanodiamond/UiO-66 hybrid nanocomposite

    , Article Chemosphere ; Volume 247 , May , 2020 Molavi, H ; Neshastehgar, M ; Shojaei, A ; Ghashghaeinejad, H ; Sharif University of Technology
    Elsevier Ltd  2020
    Abstract
    In this research, UiO-66 and its composite nanoparticles with thermally oxidized nanodiamond (OND) were synthesized via a simple solvothermal method and utilized as solid adsorbent for the removal of anionic methyl red (MR) dye and cationic malachite green (MG) dye from contaminated water. The synthesized adsorbents were analyzed by Fourier transform infrared spectroscopy (FTIR), X-ray diffraction (XRD), field emission scanning electron microscopy (FESEM), thermogravimetric analysis (TGA), N2 adsorption–desorption, and zeta potential analyzer. The influences of various factors such as initial concentrations of the dyes, adsorption process time, solution pH, solution temperature and ionic...