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    Experimental Studies on the Application of Biosensor for Detection of Toxic Compound

    , M.Sc. Thesis Sharif University of Technology Ghanavati, Mehdi (Author) ; Roosta Azad, Reza (Supervisor) ; Musavi, Abbas (Co-Advisor)
    Abstract
    In this research, an amperometric inhibition biosensor for the detection of cyanide has been fabricated by immobilization of the horseradish peroxidase (HRP) on the surface of glassy carbone electrode (GCE). Chitosan/acrylamide was applied for immobilization of HRP on the working electrode. All electrochemical measurement were carried out with three electrode: Ag/AgCl electrode as reference electrode, GCE as working electrode and platinium electrode as counter electrode which immersed in phosphate buffer solution. The amperometric measurement was done at an applied potential of -100 mV versus Ag/AgCl with a scan rate of 100 mV in the presence of hydroquinone as electron mediator and... 

    Rapid Determination of Histamine by an Enzyme-based Microfluidic Biosensor

    , M.Sc. Thesis Sharif University of Technology Moradi, Mohammad Reza (Author) ; Vossoughi, Manouchehr (Supervisor) ; Shamloo, Amir (Supervisor)
    Abstract
    Design, simulation, optimization and manufacturing of an enzyme-based microfluidic biosensor has been carried out during this research to measure histamine concentration in a sample. The designed biosensor is composed of a micro-bioreactor to degrade histamine and yield hydrogen peroxide, and a chemical reactor to measure the amount of hydrogen peroxide, using chemiluminescence methods. The geometry of the bioreactor and chemical reactor is developed through comparison and optimization of several different geometries. In theory, the designed sensor can determine histamine concentration in a range of 10M to 1mM under one minute, with a maximum error of 5%. Designed biosensor is built using... 

    Synthesis of Graphene Nanosheets for Application in Biosensors

    , M.Sc. Thesis Sharif University of Technology Rahighi Yazdi, Reza (Author) ; Akhavan, Omid (Supervisor)
    Abstract
    Graphene, the newborn nanomaterial whose unique properties has extensively drawnattention of many scientists in the recent years, is an ideal candidate for sensing applications due to its exclusive properties like extremely high specific surface area, excellent electrical conductivity, andcapability of being easily functionalized. In this research, after reviewing the attempts already performed on detection of DNA, in order to detect the four bases of DNA (G, A, T, and C) via electrochemical approach, graphene nanosheets were synthesized by the popular Hummer’s method and were deposited on a graphite rod by electrophoretic deposition with a vertical preferred orientation. To eliminate the... 

    , Ph.D. Dissertation Sharif University of Technology (Author) ; Aashuri, Hossein (Supervisor) ; Simchi, Abdolreza (Co-Advisor)
    Abstract
    We demonstrated efficient direct electron transfer from the enzyme glucose oxidase to vertically aligned gold nanorods with a diameter of ~160 nm and a length of ~2 μm that are covalently linkage to a 3-dimensional network of reduced graphene oxide nanosheets. The assembly can be prepared by a 2-step electrochemical procedure. This hybrid structure holds the enzyme in a favorable position while retaining its functionality that ultimately provides enhanced performance for enzymatic sensing of glucose without utilizing mediators. The nanorod assembly was applied to the voltammetric detection of glucose. Figures of merit include an electrochemical sensitivity of 12 µA⋅mM-1⋅cm-2 (obtained from... 

    Biosensor for Fast Detection (Based on Thyroid Hormones)

    , M.Sc. Thesis Sharif University of Technology Moradi, Farshid (Author) ; Abdekhodaie, Mohammad Jafar (Supervisor)
    Abstract
    Thyroid gland is one of the important internal organs of the body that is responsible for T3 and T4 hormones secretion. Concentration of these hormones directly influences growth of body, thus measurement concentration of thyroid hormones is one of the most common experiments all of the world, specially in our country that Hypothyroidism is common among people. Secretion of hormones in thyroid gland controlled by TSH (thyroid Stimulating Hormone) that released from Pituitary gland. TSH concentration is opposite of level of thyroid secretion. Because of interconnected relationship between these three hormones, measurement of each of them is so important. Many researches for developing... 

    Biosensor Fabrication for Fast Detection of Stroke Biomarkers

    , Ph.D. Dissertation Sharif University of Technology Shabani, Ehsan (Author) ; Mousavi, Abbas (Supervisor) ; Abdekhodaie, Mohammad Jafar (Co-Supervisor)
    Abstract
    Stroke is the second most frequent cause of death and the leading cause of disability in the world. Some effective drugs have been developed for ischemic stroke, while the golden time of use is three hours. Therefore, if stroke is diagnosed quickly, its side effects can be greatly avoided. However, it is not possible to use conventional diagnostic methods in many cases at a short time. In this work, S100β, MMP-9 and D-Dimer biomarkers were selected for rapid diagnosis of stroke based on previous studies.For this purpose, electrochemical immunosensors were developed with advantages such as low cost, ease of use, the possibility to automating the device, suitable sensitivity, reproducibility,... 

    Sensitive Detection and Quantification of Nitrite Ions by Metal-organic Frameworks/Gold Nanocomposites

    , M.Sc. Thesis Sharif University of Technology Mahdavi, Hossein (Author) ; Simchi, Abdoolreza (Supervisor) ; Tamjid Shabestari, Elnaz (Supervisor)
    Abstract
    Nitrite (〖NO〗_2^-) anions are ubiquitous within the physiological, industrial, environmental, and food industries. The potential toxicity risk of these inorganic compounds has well been recognized; thus, the precise detection of these ions by developing reliable and high-throughput analytical methods is crucial for health and environment security. In this study, we present a reagentless electrochemical biosensor using cobalt-based metal-organic frameworks (ZIF-67) and gold nanoparticles (Au NPs) for determination of nitrite ions. The developed biosensor provides the advantages of MOF properties including high surface area, hierarchical porosity, and tunable functionalities along with high... 

    A novel enzyme based biosensor for catechol detection in water samples using artificial neural network

    , Article Biochemical Engineering Journal ; Volume 128 , 2017 , Pages 1-11 ; 1369703X (ISSN) Maleki, N ; Kashanian, S ; Maleki, E ; Nazari, M ; Sharif University of Technology
    Elsevier B.V  2017
    Abstract
    Biosensors could be used as digital devices to measure the sample infield. Consequently, computational programming along with experimental achievements are required. In this study, a novel biosensor/artificial neural network (ANN) integrated system was developed. Poly (3,4-ethylenedioxy-thiophene)(PEDOT), graphene oxide nano-sheets (GONs) and laccase (Lac) were used to construct a biosensor. The simple and one-pot process was accomplished by electropolymerizing 3,4-ethylenedioxy-thiophene (EDOT) along with GONs and Lac as dopants on glassy carbon electrode. Scanning electron microscopy (SEM) and electrochemical characterization were conducted to confirm successful enzyme entrapment. The... 

    Two nanostructured polymers: Polyaniline nanofibers and new linear-dendritic matrix of poly(citric acid)-block-poly(ethylene glycol) copolymers for environmental monitoring in novel biosensors

    , Article International Journal of Polymeric Materials and Polymeric Biomaterials ; Volume 62, Issue 7 , Jul , 2013 , Pages 377-383 ; 00914037 (ISSN) Shamloo, A ; Vossoughi, M ; Alemzadeh, I ; Naeini, A. T ; Darvish, M ; Sharif University of Technology
    2013
    Abstract
    In this work two phenol biosensors, one based on polyaniline nanofibers (PNFs) and the other based on the newly created and introduced linear-dendritic matrix of poly(citric acid)-block-poly(ethylene glycol) copolymers (PCA-PEG-PCA), were chemically modified with horseradish peroxidase (HRP) enzyme. These phenol biosensors showed an oxidation peak at 0.55 V. The amperometric response for biosensors based on PNFs showed a linear response range from 2.5 × 10-6 to 2.5 × 10-5 mol/L, with a detection limit of 2.5 M phenol. Also, the amperometric response for a biosensor based on PCA-PEG-PCA showed a linear response range from 2.5 × 10-6 to 4 × 10-5 mol/L, with a detection limit of 1.5 M phenol  

    Fabrication of sensitive glutamate biosensor based on vertically aligned CNT nanoelectrode array and investigating the effect of CNTs density on the electrode performance

    , Article Analytical Chemistry ; Volume 84, Issue 14 , June , 2012 , Pages 5932-5938 ; 00032700 (ISSN) Gholizadeh, A ; Shahrokhian, S ; Iraji Zad, A ; Mohajerzadeh, S ; Vosoughi, M ; Darbari, S ; Koohsorkhi, J ; Mehran, M ; Sharif University of Technology
    2012
    Abstract
    In this report, the fabrication of vertically aligned carbon nanotube nanoelectrode array (VACNT-NEA) by photolithography method is presented. Electrochemical impedance spectroscopy as well as cyclic voltammetry was performed to characterize the arrays with respect to different diffusion regimes. The fabricated array illustrated sigmoidal cyclic voltammogram with steady state current dominated by radial diffusion. The fabricated VACNT-NEA and high density VACNTs were employed as electrochemical glutamate biosensors. Glutamate dehydrogenase is covalently attached to the tip of CNTs. The voltammetric biosensor, based on high density VACNTs, exhibits a sensitivity of 0.976 mA mM-1 cm-2 in the... 

    Investigating the effect of design parameters on the response time of a highly sensitive microbial hydrogen sulfide biosensor based on oxygen consumption

    , Article Biosensors and Bioelectronics ; Volume 70 , 2015 , Pages 106-114 ; 09565663 (ISSN) Vosoughi, A ; Yazdian, F ; Amoabediny, G ; Hakim, M ; Sharif University of Technology
    Elsevier Ltd  2015
    Abstract
    A novel hydrogen sulfide microbial biosensor was developed based on investigating the influence of four design parameters: cell concentration, immobilization bed type, hydrogen sulfide concentration, and geometrical shape of the biosensor. Thiobacillus thioparus was used as the recognition element and it was immobilized on sodium alginate as well as agarose bed. The results were optimized by the application of statistical optimization software based on response time of the system. Oxygen reduction was considered as the detection sign. Sodium alginate solution with a concentration of 2.3% (w/v) and optical density of 10 at 605. nm was found as the optimum conditions for immobilization with... 

    Novel microfluidic graphene oxide–protein amperometric biosensor for detecting sulfur compounds

    , Article Biotechnology and Applied Biochemistry ; Volume 66, Issue 3 , 2019 , Pages 353-360 ; 08854513 (ISSN) Ghaemi, A ; Abdi, K ; Javadi, S ; Shehneh, M. Z ; Yazdian, F ; Omidi, M ; Rashedi, H ; Haghiralsadat, B. F ; Asayeshnaeini, O ; Sharif University of Technology
    Wiley-Blackwell Publishing Ltd  2019
    Abstract
    Sulfur compounds are essential for many industries and organisms; however, they cause serious respiratory problems in human beings. Therefore, determination of sulfur concentration is of paramount importance. The research approach in the field of detecting contaminants has led to smaller systems that provide faster and more effective ways for diagnosis purposes. In this study, a novel portable amperometric graphene oxide–protein biosensor platform is investigated. The main characteristic of this structure is the implementation of a microfluidic configuration. With albumin metalloprotein as the biorecognition element, graphene oxide was synthesized and characterized by transmission electron... 

    Synthesis of Aligned Carbon Nanotubes and Their Modification with Noble Metallic Nanoparticles as Organic Analytes Biosensors

    , Ph.D. Dissertation Sharif University of Technology Fayazfar, Haniyeh (Author) ; Afshar, Abdollah (Supervisor) ; Dolati, Abolghasem (Supervisor)
    Abstract
    An efficient method has been developed to synthesize well-aligned multi-walled carbon nanotubes (MWCNTs) on a conductive Ta substrate by chemical vapor deposition (CVD). By varying CVD parameters, aligned CNTs (A-MWCNTs) with diameter between 20-100 nm and length of some micrometers with bamboo-like shapes were produced. Free-standing MWCNTs arrays were functionalized and purified through electrochemical oxidation. Then in order to improve the performance, facile template-free electrochemical routes were developed for the shape-selective synthesis of less-common Au nanostructures, including flower, sphere, dendrite, sheet and rod on A-CNTs at room temperature. The results showed that the... 

    Electrodeposition of Pt nanostructures and its Application as Glucose Sensor

    , Ph.D. Dissertation Sharif University of Technology Mahshid, Sahar Sadat (Author) ; Dolati, Abolghasem (Supervisor) ; Ghorbani, Mohammad (Supervisor)
    Abstract
    The present work describes sensing application of modified Pt nanostructures towards detection of glucose. Modified Pt nanostructured electrodes were prepared using electrodeposition method such as chronoampermetry and potentiostatic pulse methods. The electrodeposition of Pt nanostructures was first studied by voltammetry and amperommetry techniques and then potentiostatic pulse method has been used to produce the alloyed structures of platinum. In this regard, the first electrode was proposed based on alloyed Pt/Ni nanowire arrays (NWAs) for the non-enzymatic detection of glucose. The Pt/Ni NWAs were prepared by pulse electrodeposition of Pt and Ni within a nano-pore polycarbonate (PC)... 

    Over 10-b On-Chip Impedance Measurement System for High Frequency Range

    , M.Sc. Thesis Sharif University of Technology Mirjalili, Ramin (Author) ; Atarodi, Mojtaba (Supervisor) ; Mehrani, Khashayar (Supervisor)
    Abstract
    Diabetes is one of the most catastrophic diseases in the world. There will be an end to patients’ problems if scientists can invent the artificial pancreas, but there is no implantable sensing core available. All of the sensors used for measuring blood glucose level were based on an electrochemical sensor which will generate a glucose level dependent electric current. The chemical structure of that sensor will deny its usability for in vivo applications. By exploring several biological and electrical literatures we introduced a fully electrical method for sensing the blood glucose level by impedance measurement. In this thesis we introduced a new method for sensing the blood glucose... 

    Frequency Domain HF on-chip Impedance Spectroscope with Over 10 bit Resolution

    , M.Sc. Thesis Sharif University of Technology Bakhshiani, Mehran (Author) ; Atarodi, Mojtaba (Supervisor) ; Mehrani, Khashayar (Supervisor)
    Abstract
    Impedance spectroscopy is known as one of the important integrated sensing methods in micro scale Biosensors and electrochemical sensors. Recently, Impedance spectroscopy has been noticed in many micro scale applications. These micro scale applications is being developed specially in bioelectronics and biomedical. The goal of this thesis is designing an on-chip impedance spectroscope system for high frequency with 10 bits resolution via fully electrical blood glucose concentration measurement. This system extracts the blood glucose concentration data through measuring the permittivity coefficient of blood at 1 GHz frequency. In this thesis, new method for high frequency high resolution... 

    Experimental Study on Biosensors for Detection of Biohazards with Nano-structured Metal Oxides Basis

    , M.Sc. Thesis Sharif University of Technology Dadfarmay, Sajad (Author) ; Mashayekhan, Shohreh (Supervisor) ; Vosoughi, Manouchehr (Supervisor)
    Abstract
    In this research, fabrication of a mediator free nano-biosensor for the detection of cyanide has been studied. This biosensor utilizes 75 nm diameter (nano) ZnO particles synthesized with sol- gel method for modification and immobilization of Horseradish peroxidase (HRP). Cyanide plays inhibitory role in decomposition of H2O2 while HRP plays catalyst role in this reaction. Cyanide inhibits enzyme activity thorough binding with enzyme active sites and result in decreasing electrical current in electrochemical decomposition of H2O2. Amperometery response of biosensor shows linear relation between inhibition percent and cyanide concentration in range of 3µM - 24µM with detection limit of 0.62µM... 

    Fabrication of 3D Graphene/Gold Porous Electrode for Biosensing Applications

    , M.Sc. Thesis Sharif University of Technology Rahmati, Reza (Author) ; Simchi, AbdolReza (Supervisor) ; Tamjid Shabestari, Elnaz (Supervisor)
    Abstract
    Today, the use of carbon nanostructures hybridized with noble metals has attracted considerable attention for the fabrication of bio-electrochemical sensors. Since the specific surface area has an immense effect on the sensing response, three-dimensional structures of graphene have a great capability to utilize in these sensors. In this research, three-dimensional graphene was provided on the porous nickel foam by chemical vapor deposition technique. By evaluation of raman spectroscopy, the time period of 20 minutes for solving of the carbon atoms into the nickel foam was selected as the main parameter of optimized conditions for the synthesis of graphene. Afterward, production of few-layer... 

    Design and Fabrication of Microfluidic Biosensors based on Modified Electrospun Nanofibrous Membranes for Biomarkers Detection

    , Ph.D. Dissertation Sharif University of Technology Mahmoudifard, Matin (Author) ; Vosoughi, Manuchehr (Supervisor) ; Soleimani, Masoud (Supervisor) ; Soudi, Sara (Supervisor)
    Abstract
    The accurate assessment of biomarkers likes proteins, hormones or other biomolecules that amount of them changes with state of disease or level of treatment and gives diagnostic information is a difficult duty. In these samples, pathogens exist in small quantity compared to other background molecules. Therefore, appropriate sampling process for concentrating and separating pathogens from the matrix should be developed in order to provide rapid and accurate pathogen detection test. In this thesis design and fabrication of microfluidic biosensors based on the modified nanofibrous membranes were investigated and explained. PES nanofibrous membrane with carboxyl functional groups for covalent... 

    Design and Implementation of Fully Integrated Frequency Synthesizer for Biomedical Applications

    , M.Sc. Thesis Sharif University of Technology Aghlmand, Fatemeh (Author) ; Atarodi, Mojtaba (Supervisor)
    Abstract
    Fully integrated frequency synthesizer is one of the important system-on-chips building blocks. Among this circuit’s remarkable applications, Bioelectronics field is very common. In these applications, advanced microelectronic circuits are used in order to diagnosis and treatment of diseases. The aim of this thesis is design and implementation a wideband frequency synthesizer in a 0.18um CMOS technology. The main usage of this circuit is in a fully integrated implantable biomedical sensory chip. This circuit generates two necessary local signals in sensory chip to stimulus cells and process the information.
    Frequency synthesizer is based on phased locked loop (PLL) circuit and produce...