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    Modeling and Manipulation of Intracytoplasmic Cell Injection

    , M.Sc. Thesis Sharif University of Technology Moshtaghi, Behnam (Author) ; Ahmadian, Mohammad Taghi (Supervisor)
    Abstract
    The injection process on cell is a very accurate and sensitive operation. This method is used for several new invented approaches such as tracytoplasmic Cell Injection or drug delivery. Controlling the injection force in micro scale is one of the problems of mentioned operations. Current huge and expensive laboratorial devices are helping the operators to do injection operation with :nore success. In this study a simple and novel microelectromechanical (MEMS) mechanism for doing injection process automatically on the biological cells is proposed. In order to controlling this device properly, we should model and simulate the operation condition from initial position to final condition. This... 

    Numerical Simulation and Characterization of a Micro-mixer with Moving Walls

    , M.Sc. Thesis Sharif University of Technology Omidvar, Ahmad Reza (Author) ; Saeedi , Mohammad Saeed (Supervisor) ; Sani, Mahdi (Supervisor)
    Abstract
    Recent advances in micro-technology are finding important applications especially in chemical and biological processes. In these applications, mixing has a profound importance. Due to the inherent low Reynold’s number flow in micro systems, diffusion mixing is the dominant mixing mechanism at these scales. This is in contrary to the high Reynold’s number ordinary applications where turbulent mixing plays the major role. There are two major classes of micro-mixers: passive and active. Passive micro-mixers rely on geometric features to enhance mixing. Active micro-mixers on the other hand, use external excitation to promote and control the rate of mixing. In this work, using numerical tools,... 

    Real-time Vision-based Approach for Estimating Tool-tissue Contact Force with Application to Laparoscopic Surgery

    , M.Sc. Thesis Sharif University of Technology Taheri, Mohammad (Author) ; Behzadipour, Saeed (Supervisor)
    Abstract
    Lack of force feedback during minimally invasive procedures is one of the downsides of such interventions and might result to excessive damage to surrounding tissues. The goal of the present research is to introduce a vision-based approach to estimate contact forces on soft tissues. In this approach, a model was developed in which, image of deformation of a sample soft tissue, under the jaws of laparoscopic gripper, is the input and the output is the gripper force. In this work, a FEM of soft tissue in contact with jaws of a laparoscopic tool is developed. . In the model, the effects of friction between the tool and tissue is considered which was not included in the previous studies. After... 

    Investigation of Effective Microstructural Parameters on the Stress Whitening in Polypropylene Blends

    , Ph.D. Dissertation Sharif University of Technology Farmahini Farahani, Mohammad (Author) ; Bagheri, Reza (Supervisor)
    Abstract
    Stress whitening is a type of discoloration that can occur in variety of polymers used in automotive and household industries. The current research tries to investigate the effective microstructural parameters such as strain rate, rubber second phase, and branched polypropylene (PP) on the stress whitening in polypropylene in order to propose toughed PP blends with limited stress whitening. It is shown that increasing the strain rate in tensile test results in formation of more visible whitened area within the plastically deformed zone. This is the consequence of further growth of micro-voids at higher strain rates. The results are in accordance with the Mie scattering concepts. Besides, the... 

    Hyperelastic Modeling of Atomistic Continuum in the Presence of Inhomogeneity

    , M.Sc. Thesis Sharif University of Technology Asadollahzadeh, Niloofar (Author) ; Khoei, Amir Reza (Supervisor) ; Jahanshahi, Mohsen (Supervisor)
    Abstract
    In this study, a pioneer multiscale hierarchical molecular dynamics (MD) – finite element (FE) coupling method is proposed to illustrate the influence of large deformation on mechanical properties of heterogeneous nano-crystalline structures. The embedded-atom method (EAM) of many-body interatomic potential is applied to evaluate pairwise interactions between atoms in the metallic alloys with face-centered-cubic (FCC) lattice structure at room temperature. In addition, the Nose-Hoover thermostat is used to control the instability of temperature. A weight average between the lattice parameters of atomic structures is utilized in order to calculate the equivalent lattice parameter. The... 

    Multiscale Investigation of Plastic Behavior in Crystalline Metals

    , M.Sc. Thesis Sharif University of Technology Davoodi, Sina (Author) ; Khoei, Amir Reza (Supervisor) ; Jahanshahi, Mohsen (Co-Advisor)
    Abstract
    In this study, a modern multiscale sequential molecular dynamics (MD) – finite element (FE) coupling method is proposed to represent the role of grain boundary (GB) planar defect on mechanical properties of crystalline structures at various temperatures. Different Grain Boundary misorientation angle is considered and the temperature varies from 0 up to 800 K. The embedded-atom method (EAM) many-body interatomic potential is implemented to consider pairwise interactions between atoms in the crystalline structures with face-centered-cubic (FCC) lattice structure at different temperatures. In addition, the Nose-Hoover thermostat is employed to adjust the fluctuation of temperature. The atomic... 

    Temperature-dependent Multi Scale Large Deformation Simulation of Heterogeneous Crystals

    , M.Sc. Thesis Sharif University of Technology Gordan, Ali (Author) ; Khoei, Amir Reza (Supervisor) ; Jahanshahi, Mohsen (Co-Advisor)
    Abstract
    In this study, a novel and unprecedented multi-scale hierarchical molecular dynamics (MD) – finite element (FE) coupling method is proposed to demonstrate the influence of temperature on mechanical properties of heterogeneous Nano-crystalline structures. The embedded-atom method (EAM) many-body interatomic potential is implemented to consider pairwise interactions between atoms in the metallic alloys with face-centered-cubic (FCC) lattice structure at different temperatures. In addition, the Nose-Hoover thermostat is employed to adjust the fluctuation of temperature. In order to calculate the equivalent lattice parameter, a weight average between the lattice parameters of atomic structures... 

    A Coupling Atomistic-continuum Approach for Modeling Dislocation in Plastic Behavior of Nano-structures

    , M.Sc. Thesis Sharif University of Technology Omrani Pournava, Amir Mohsen (Author) ; Khoei, Amir Reza (Supervisor) ; Jahanshahi, Mohsan (Co-Advisor)
    Abstract
    In this study, a novel multi-scale hierarchical method has been employed to explore the role of edge dislocation on Nano-plates with hexagonal atomic structure in large deformation. multiscale hierarchical atomistic/molecular dynamics (MD) finite element (FE) coupling methods are proposed to demonstrate the impact of dislocation on mechanical properties of Magnesium in large deformation. The atomic nonlinear elastic parameters are attained via computing first-order derivation of stress with respect to strain of Representative Volume Element (RVE). To associate between atomistic and continuum level, the mechanical characteristics are captured in the atomistic scale and transferred to the... 

    Temperature-Dependent Multiscale Simulation of Single Layer Graphene Sheet in Large Deformation

    , M.Sc. Thesis Sharif University of Technology Tanhadoust, Amin (Author) ; Khoei, Amir Reza (Supervisor) ; Jahanshahi, Mohsen (Co-Advisor)
    Abstract
    In this study, two multiscale hierarchical atomisyic/molecular dynamics (MD)–finite element (FE) coupling methods are proposed to illustrate the influence of temperature on mechanical properties of SLGS in large deformation. The Tersoff interatomic potential is implemented, in addition, the Nose-Hoover thermostat and local harmonic approximation are employed to adjust the fluctuation of temperature in CB and MD, respectively. The atomic nonlinear elastic parameters are obtained via computing second-order derivative of Representative atom’s energy and RVE’s strain energy density with respect to deformation criterions (deformation gradient and Green strain tensor). To bridge between atomistic... 

    Multi-scale Analysis of Dislocation Emission for Nano-crystalline Structures

    , M.Sc. Thesis Sharif University of Technology Fattahi Faradonbeh, Mehran (Author) ; Khoei, Amir Reza (Supervisor) ; Jahanshahi, Mohsen (Supervisor)
    Abstract
    In this study, a new multi-scale hierarchical technique has been employed to investigate the role of edge dislocation on nano-plates with hex atomic structure in large deformation. Two multiscale hierarchical atomistic/molecular dynamics (MD)–finite element (FE) coupling methods are proposed to illustrate the influence of temperature on mechanical properties of Magnesium in large deformation. The atomic nonlinear elastic parameters are obtained via computing second-order derivative of Representative atom’s energy and RVE’s strain energy density with respect to deformation criterions (deformation gradient and Green strain tensor) to bridge between atomistic and continuum level, the... 

    On The Behavior of Low-Rise, Irregular, Dual Structures

    , M.Sc. Thesis Sharif University of Technology Khazaei, Siamak (Author) ; Mofid, Masoud (Supervisor)
    Abstract
    The Response modification factor R represents the behavior of the structure such as ductility, overstrength and the inherent redundancy. This factor shall be defined according to the type of lateral force resisting system. However, there are some complexities and/or uncertainties in codes related to the R factor according to the height, form of irregularities and structural systems. Therefore, from the scientific point of view as well as reliability, it is very clear that the R factor cannot be similar for all kinds of structures, categorized as a specific group. In this investigation, assuming a low-rise, vertically irregular structure with a heliport which has a dual structural system... 

    Extended Finite Element Modeling of Large Deformation with Approprate Blending Elements

    , M.Sc. Thesis Sharif University of Technology Ehsaniardestani, Hedieh (Author) ; Khoei, Amir Reza (Supervisor)
    Abstract
    In a classical finite element approach, interfaces are tracked and meshed. This mesh strategy introduces mesh distortions and difficulties to mesh the possibly complex interface shape. The Partition of Unity Method (PUM) alleviates these difficulties by allowing the discontinuities to be mesh-independent. This thesis concentrates on the blending elements in the eXtended Finite Element Method (XFEM).
    The XFEM method enables local enrichments of approximation spaces. The standard finite elements are used in the major part of the domain and enriched elements are employed where special solution properties such as discontinuities and singularities shall be captured. In the extended finite... 

    Contact Friction Modeling Using a new Node-to-Surface Algorithm

    , M.Sc. Thesis Sharif University of Technology Vafa, Alireza (Author) ; Khoei, Amir Reza (Supervisor)
    Abstract
    The present research illustrate the finite element modeling of contact between solid bodies, with a special emphasis on the imposing the contact constraints and modification of contact properties on surface in the case of frictional slip. A new approach for both two-dimensional and three-dimensional formulation of contact constraint that allows for a simple and unified treatment of all potential contact scenarios in the presence of large deformations in static case, is presented. The most important outstanding issue in this approach is symmetrical contact stiffness matrix which reduces computational efforts. Based on the observation of numerical results and comparison by experimental models,... 

    Development of a Temperature-Dependent Constitutive Model for Anisotropic Metal Diaphragm Using Experimental Method

    , Ph.D. Dissertation Sharif University of Technology Ashrafian, Mohammad Mahdi (Author) ; Hosseini Kordkheili, Ali (Supervisor)
    Abstract
    The purpose of this thesis is to use experimental and numerical tools to develop new constitutive models based on the Johnson Cook's model to predict the plastic deformation and failure of metallic diaphragms. Initially as the first case study, by designing and constructing a bulge test mechanism, the elastic-plastic behavior of 0.05 mm thickness pure aluminum diaphragms for a temperature range of 25-150℃ and large strains was extracted. Then, by presenting an innovative method, the biaxial stress-strain curves are transformed into uniaxial curves. By examining the observed behavior, a new constitutive model is developed based on the Johnson Cook's model. The ability of this constitutive... 

    A Layerwise Dynamic Non-Linear Formulation for Multi-Layered Panels in the Presence of Viscoelastic Layer and Sma Wires

    , Ph.D. Dissertation Sharif University of Technology Khorasani, Reza (Author) ; Hosseini Kordkheili, Ali (Supervisor)
    Abstract
    This thesis aims to introduce a numerical method for investigating the appropriate arrangement of visco-pseudo-elastic dampers applicable to shell and plate structures under large deformation. These passive dampers are considered as viscoelastic layers and discrete shape memory alloy (SMA) wires in which this combination improves their overall efficiency and reduces their drawbacks. Also, the main advantages of these dampers are discussed during some illustrative problems. The current finite element formulation is based on an incremental updated Lagrangian (UL) approach along with the Newmark's integration technique. In the layerwise shell element, the Mindlin-Reissner theory is adopted in... 

    Micro-Mechanical Analysis of Matrix Shear Deformation Effect on Energy Release Rate of Fiber/Matrix Interface Debond in Unidirectional Fiber-Reinforced Plastic Composites

    , M.Sc. Thesis Sharif University of Technology Bazargani, Mahsa (Author) ; Hosseini Kordkheili, Ali (Supervisor)
    Abstract
    The present thesis deals with the effect of matrix shear deformation on energy released due to debonding at fiber/matrix interface during fiber pull out test, which is modeled using two concentric cylinders representing fiber and matrix. Tensile on fiber causes a shear stress at the interface. When this stress exceeds the tensile strength of the interface, debonding occurs at the interface and grows as a crack along the interface. This debonding causes a relative axial displacement between fiber and matrix along the debonded interface, which varies along the debond crack. How fiber/matrix relative displacement changes along the debond region is not known. Thus, the fiber/matrix interface is... 

    A Nonlinear Layerwise Shell Finite Element for Delamination Analysis of Laminated Composite Structures under Large Deformation

    , Ph.D. Dissertation Sharif University of Technology Soltani, Zahra (Author) ; Hosseini Kordkheili, Ali (Supervisor)
    Abstract
    This thesis aims to develop a numerically efficient nonlinear layer-wise shell element formulation for delamination analysis of laminated composite shell structures. The element, in a mesoscale scheme, is formulated based on a zig-zag theory and features three translational degrees of freedom for each node on the mid-surface of the shell in addition with two rotational degrees of freedom for each layer. In this way, the displacement field is formulated via adapting the Mindlin-Reissner theory in each layer and an ordered second-order algorithm for finite rotations. To verify the proposed formulation, many popular benchmark problems for geometric nonlinear analysis of shell problems are... 

    Buckling Analysis of Reinforced Composite Conical Shells under Axial Compressive Load using GDQ Method

    , M.Sc. Thesis Sharif University of Technology Gholami, Peyman (Author) ; Kouchakzadeh, Mohammad Ali (Supervisor) ; Shakouri, Meysam ($item.subfieldsMap.e) ; Noghabi, Mohammad ($item.subfieldsMap.e)
    Abstract
    The object of this study is to determine the buckling load of reinforced composite conical shells under axial compression. . Shells are reinforced by stringers and rings and the boundary conditions are assumed to be simply supported. At first the equilibrium equations are obtained using the first order shear deformation theory (FSDT), smeared stiffener technique and principle of minimum potential energy. In the following, the resulting equations which are the system of five variable coefficient partial differential equations in terms of displacement components are investigated by generalized differential quadrature method (GDQM). Finally the standard eigenvalue equation is formed and the... 

    Analysis of Vibrations and Buckling of Conical Shell Homogeneous Orthotropic

    , M.Sc. Thesis Sharif University of Technology Zafari, Danial (Author) ; Kouchakzadeh, Mohammad Ali (Supervisor)
    Abstract
    The purpose of this thesis parametric study the natural frequencies and the criti-cal buckling multilayer composites truncated cone with the effect of lateral shear deformation. For this purpose five-bending tensile deformation equation of motion of the truncated cone shell in a suitable coordinate system have been studied. Then solve the five-coordinate movement for power series-are consid-ered. The natural frequencies and critical buckling force for the various truncat-ed cones with four different boundary conditions are calculated and the results with the results of similar conical shells with the same boundary conditions, tak-ing into account the effect of lateral shear deformation and... 

    Computational Simulation of High Density Ratio Drop Deformation and Breakup, Using Lattice Boltzmann Method

    , M.Sc. Thesis Sharif University of Technology Kiani, Mehran (Author) ; Taeibi Rahni, Mohammad (Supervisor) ; Karbaschi, Mohsen (Supervisor)
    Abstract
    Deformation and breakup of drops are the basisof many interfacial flow studies and appear in a number of industrial applications, e.g., spray painting, spray combustion, emulsion, foam, sedimentation, and rain. Following their formation, drops may enter a region where hydrodynamicforces are large enough to cause their significant deformation and breakup. When a drop breaks apart into a multitude of small fragments due to disruptive hydrodynamicforces, the process is termed secondary atomization or breakup. Due to many engineering and scientific applications of multiphase and multi-component flows, they have been the main topic of many researchers for many years. Particularly, interfacial...