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    Investigation of cervical spine curvature in females with postural neck pain

    , Article Journal of Zanjan University of Medical Sciences and Health Services ; Volume 25, Issue 110 , 2017 , Pages 110-119 ; 16069366 (ISSN) Salahzadeh, Z ; Maroufi, N ; Ahmadi, A ; Behtash, H ; Hazhir Sahneh, S ; Parnianpour, M ; Sharif University of Technology
    Zanjan University of Medical Sciences and Health Services  2017
    Abstract
    Background and Objective: Changes in the cervical spine curvature leads to increased shear force and compression stress on cervical spine and axial loading in different cervical segments. The objective of this study was to compare the general and segmental curvature in the upper and lower cervical spine of women with postural neck pain and Forward Head Posture (FHP), women without neck pain but with FHP and healthy women. Material and Methods: 45 women were divided into three groups: 15 women with postural neck pain and FHP, 15 women without neck pain but with FHP and 15 healthy women. Photography was used to assess neck posture while cervical spine curvature was measured using fluoroscopy... 

    Evaluation of the effects of fullerene c60 nanoparticles on oxidative stress parameters in normal rats liver and brain

    , Article Journal of Advances in Medical and Biomedical Research ; Volume 27, Issue 124 , 2019 , Pages 8-15 ; 26766264 (ISSN) Namadr, F ; Bahrami, F ; Bahri, Z ; Ghanbari, B ; Elahi, S. A ; Mohammadi, M. T ; Sharif University of Technology
    Zanjan University of Medical Sciences and Health Services  2019
    Abstract
    Background & Objective: The potent antioxidant property of fullerene C60 nanoparticles and their derivatives has been demonstrated in a wide range of in vitro and in vivo studies. Hence, we examined the effects of fullerene C60 on the oxidative stress parameters in brain and liver of the rats in normal situation. Materials & Methods: The study was performed in two groups of Wistar rats (each group, n = 6); normal and fullerene-treated normal animals. Treated rats received fullerene via oral gavage at dose of 1 mg/kg/day for 60 days. At termination of the study, the oxidative stress parameters were determined in brain and liver tissues, including the contents of glutathione (GSH) and... 

    Subject-specific and function-specific applicability of a hand-forearm musculoskeletal model

    , Article Biomedical Engineering - Applications, Basis and Communications ; Volume 27, Issue 6 , 2015 ; 10162372 (ISSN) Hosseininejad, S ; Farahmand, F ; Fateh, H. R ; Forogh, B ; Sharif University of Technology
    World Scientific Publishing Co. Pte Ltd  2015
    Abstract
    There is ambiguity on the quantitative validity of the predictions revealed by musculoskeletal models for muscle forces. This study investigated the consistency between the predictions of a musculoskeletal model of the upper limb and the experimental data for a number of different subjects and functional tasks. Six normal subjects performed isokinetic eccentric or isotonic concentric contraction tests of the wrist muscles in well controlled conditions, using a robotic apparatus, and the net joint torque and angular velocities, as well as the surface electromyograms (EMG) signals of the muscles, were recorded. The experiments were then simulated using a parametric musculoskeletal model of... 

    A comparative study of optimization algorithms for wavefront shaping

    , Article Journal of Innovative Optical Health Sciences ; Volume 12, Issue 4 , 2019 ; 17935458 (ISSN) Fayyaz, Z ; Mohammadian, N ; Rahimi Tabar, M. R ; Manwar, R ; Avanaki, K ; Sharif University of Technology
    World Scientific Publishing Co. Pte Ltd  2019
    Abstract
    By manipulating the phase map of a wavefront of light using a spatial light modulator, the scattered light can be sharply focused on a specific target. Several iterative optimization algorithms for obtaining the optimum phase map have been explored. However, there has not been a comparative study on the performance of these algorithms. In this paper, six optimization algorithms for wavefront shaping including continuous sequential, partitioning algorithm, transmission matrix estimation method, particle swarm optimization, genetic algorithm (GA), and simulated annealing (SA) are discussed and compared based on their efficiency when introduced with various measurement noise levels  

    Adaptive sparse representation for MRI noise removal

    , Article Biomedical Engineering - Applications, Basis and Communications ; Volume 24, Issue 5 , October , 2012 , Pages 383-394 ; 10162372 (ISSN) Khalilzadeh, M. M ; Fatemizadeh, E ; Behnam, H ; Sharif University of Technology
    World Scientific  2012
    Abstract
    Sparse representation is a powerful tool for image processing, including noise removal. It is an effective method for Gaussian noise removal by taking advantage of a fixed and learned dictionary. In this study, the variable distribution of Rician noise is reduced in magnetic resonance (MR) images by sparse representation based on reconstruction error sets. Standard deviation of Gaussian noise is used to find these errors locally. The proposed method represents two formulas for local error calculation using standard deviation of noise. The acquired results from the real and simulated images are comparable, and in some cases, better than the best Rician noise removal method due to the... 

    Chemometrics comparison of gas chromatography with mass spectrometry and comprehensive two-dimensional gas chromatography with time-of-flight mass spectrometry Daphnia magna metabolic profiles exposed to salinity

    , Article Journal of Separation Science ; Volume 41, Issue 11 , 2018 , Pages 2368-2379 ; 16159306 (ISSN) Parastar, H ; Garreta Lara, E ; Campos, B ; Barata, C ; Lacorte, S ; Tauler, R ; Sharif University of Technology
    Wiley-VCH Verlag  2018
    Abstract
    The performances of gas chromatography with mass spectrometry and of comprehensive two-dimensional gas chromatography with time-of-flight mass spectrometry are examined through the comparison of Daphnia magna metabolic profiles. Gas chromatography with mass spectrometry and comprehensive two-dimensional gas chromatography with mass spectrometry were used to compare the concentration changes of metabolites under saline conditions. In this regard, a chemometric strategy based on wavelet compression and multivariate curve resolution–alternating least squares is used to compare the performances of gas chromatography with mass spectrometry and comprehensive two-dimensional gas chromatography with... 

    A continuous flow microfluidic device based on contactless dielectrophoresis for bioparticles enrichment

    , Article Electrophoresis ; Volume 39, Issue 3 , 2018 , Pages 445-455 ; 01730835 (ISSN) Rahmani, A ; Mohammadi, A. A ; Kalhor, H. R ; Sharif University of Technology
    Wiley-VCH Verlag  2018
    Abstract
    In recent years, applications of dielectrophoresis-based platforms have been recognized as effective and dependable approach to separate cells and bioparticles, suspended in different carrier fluids, based on particle size and electrical properties. In this study, a microfluidic device was fabricated by an unprecedented electrode pattern, and several experiments were performed to enrich samples including either of yeast, Escherichia coli, or latex particles. A chemical deposition-based method was employed for fabrication of microelectrodes, inducing nonuniform electric field required for dielectrophoresis-based separation. One major advantage of our employed method is low fabrication cost,... 

    Development of multi-response optimization and quadratic calibration curve for determination of ten pesticides in complex sample matrices using QuEChERS dispersive liquid–liquid microextraction followed by gas chromatography

    , Article Journal of Separation Science ; Volume 42, Issue 23 , 2019 , Pages 3553-3562 ; 16159306 (ISSN) Balsini, P ; Parastar, H ; Sharif University of Technology
    Wiley-VCH Verlag  2019
    Abstract
    In this study, QuEChERS combined with dispersive liquid-liquid microextraction is developed for extraction of ten pesticides in complex sample matrices of water and milk. In this regard, effective factors of proposed extraction technique combined with gas chromatography with flame ionization detector were designed, modeled, and optimized using central composite design, multiple linear regression, and Nelder–Mead simplex optimization. Later, univariate calibration model for ten pesticides was developed in concentration range of 0.5–100 ng/mL. Surprisingly, quadratic calibration behavior was observed for some of the pesticides. In this regard, Mandel's test was used for evaluating linearity... 

    3D Bioprinting of oxygenated cell-laden gelatin methacryloyl constructs

    , Article Advanced Healthcare Materials ; Volume 9, Issue 15 , 2020 Erdem, A ; Darabi, M. A ; Nasiri, R ; Sangabathuni, S ; Ertas, Y. N ; Alem, H ; Hosseini, V ; Shamloo, A ; Nasr, A. S ; Ahadian, S ; Dokmeci, M. R ; Khademhosseini, A ; Ashammakhi, N ; Sharif University of Technology
    Wiley-VCH Verlag  2020
    Abstract
    Cell survival during the early stages of transplantation and before new blood vessels formation is a major challenge in translational applications of 3D bioprinted tissues. Supplementing oxygen (O2) to transplanted cells via an O2 generating source such as calcium peroxide (CPO) is an attractive approach to ensure cell viability. Calcium peroxide also produces calcium hydroxide that reduces the viscosity of bioinks, which is a limiting factor for bioprinting. Therefore, adapting this solution into 3D bioprinting is of significant importance. In this study, a gelatin methacryloyl (GelMA) bioink that is optimized in terms of pH and viscosity is developed. The improved rheological properties... 

    Investigation of a two-step device implementing magnetophoresis and dielectrophoresis for separation of circulating tumor cells from blood cells

    , Article Engineering in Life Sciences ; Volume 20, Issue 7 , 2020 , Pages 296-304 Shamloo, A ; Yazdani, A ; Saghafifar, F ; Sharif University of Technology
    Wiley-VCH Verlag  2020
    Abstract
    Identifying tumor cells from a pool of other cells has always been an appealing topic for different purposes. The objective of this study is to discriminate circulating tumor cells (CTCs) from blood cells for diagnostic purposes in a novel microfluidic device using two active methods: magnetophoresis and dielectrophoresis. The most specific feature of this device is the differentiation of CTCs without labeling them in order to achieve a more reliable and less complicated method. This device was analyzed and evaluated using finite element method. Four cell lines are separated in this device containing red blood cells, platelets, white blood cells, and CTCs. Primarily, red blood cells and... 

    Temporal activation of LRH-1 and RAR-γ in human pluripotent stem cells induces a functional naïve-like state

    , Article EMBO Reports ; Volume 21, Issue 10 , 2020 Taei, A ; Kiani, T ; Taghizadeh, Z ; Moradi, S ; Samadian, A ; Mollamohammadi, S ; Sharifi Zarchi, A ; Guenther, S ; Akhlaghpour, A ; Asgari Abibeiglou, B ; Najar Asl, M ; Karamzadeh, R ; Khalooghi, K ; Braun, T ; Hassani, S. N ; Baharvand, H ; Sharif University of Technology
    Wiley-VCH Verlag  2020
    Abstract
    Naïve pluripotency can be established in human pluripotent stem cells (hPSCs) by manipulation of transcription factors, signaling pathways, or a combination thereof. However, differences exist in the molecular and functional properties of naïve hPSCs generated by different protocols, which include varying similarities with pre-implantation human embryos, differentiation potential, and maintenance of genomic integrity. We show here that short treatment with two chemical agonists (2a) of nuclear receptors, liver receptor homologue-1 (LRH-1) and retinoic acid receptor gamma (RAR-γ), along with 2i/LIF (2a2iL) induces naïve-like pluripotency in human cells during reprogramming of fibroblasts,... 

    A hydrogen-bonded extracellular matrix-mimicking bactericidal hydrogel with radical scavenging and hemostatic function for ph-responsive wound healing acceleration

    , Article Advanced Healthcare Materials ; Volume 10, Issue 3 , 2021 ; 21922640 (ISSN) Ahmadian, Z ; Correia, A ; Hasany, M ; Figueiredo, P ; Dobakhti, F ; Eskandari, M. R ; Hosseini, S.H ; Abiri, R ; Khorshid, S ; Hirvonen, J ; Santos, H. A ; Shahbazi, M. A ; Sharif University of Technology
    Wiley-VCH Verlag  2021
    Abstract
    Generation of reactive oxygen species, delayed blood clotting, prolonged inflammation, bacterial infection, and slow cell proliferation are the main challenges of effective wound repair. Herein, a multifunctional extracellular matrix-mimicking hydrogel is fabricated through abundant hydrogen bonding among the functional groups of gelatin and tannic acid (TA) as a green chemistry approach. The hydrogel shows adjustable physicochemical properties by altering the concentration of TA and it represents high safety features both in vitro and in vivo on fibroblasts, red blood cells, and mice organs. In addition to the merit of facile encapsulation of cell proliferation-inducing hydrophilic drugs,... 

    A hydrogen-bonded extracellular matrix-mimicking bactericidal hydrogel with radical scavenging and hemostatic function for ph-responsive wound healing acceleration

    , Article Advanced Healthcare Materials ; Volume 10, Issue 3 , 2021 ; 21922640 (ISSN) Ahmadian, Z ; Correia, A ; Hasany, M ; Figueiredo, P ; Dobakhti, F ; Eskandari, M. R ; Hosseini, S. H ; Abiri, R ; Khorshid, S ; Hirvonen, J ; Santos, H. A ; Shahbazi, M. A ; Sharif University of Technology
    Wiley-VCH Verlag  2021
    Abstract
    Generation of reactive oxygen species, delayed blood clotting, prolonged inflammation, bacterial infection, and slow cell proliferation are the main challenges of effective wound repair. Herein, a multifunctional extracellular matrix-mimicking hydrogel is fabricated through abundant hydrogen bonding among the functional groups of gelatin and tannic acid (TA) as a green chemistry approach. The hydrogel shows adjustable physicochemical properties by altering the concentration of TA and it represents high safety features both in vitro and in vivo on fibroblasts, red blood cells, and mice organs. In addition to the merit of facile encapsulation of cell proliferation-inducing hydrophilic drugs,... 

    Combinational therapy of lithium and human neural stem cells in rat spinal cord contusion model

    , Article Journal of Cellular Physiology ; Volume 234, Issue 11 , 2019 , Pages 20742-20754 ; 00219541 (ISSN) Mohammadshirazi, A ; Sadrosadat, H ; Jaberi, R ; Zareikheirabadi, M ; Mirsadeghi, S ; Naghdabadi, Z ; Ghaneezabadi, M ; Fardmanesh, M ; Baharvand, H ; Kiani, S ; Sharif University of Technology
    Wiley-Liss Inc  2019
    Abstract
    A large number of treatment approaches have been used for spinal cord injury improvement, a medically incurable disorder, and subsequently stem cell transplantation appears to be a promising strategy. The main objective of this study is to ascertain whether combinational therapy of human neural stem cells (hNSCs) together with lithium chloride improves cell survival, proliferation, and differentiation in a rat spinal contusion model, or not. Contusive spinal cord injury was implemented on Wistar male rats. Experimental groups comprised of: control, hNSCs transplanted, lithium chloride (Li), and hNSCs and lithium chloride (hNSCs + Li). In every experimental group, locomotor activity score and... 

    Accuracy Quantification of the Reverse Engineering and High-Order Finite Element Analysis of Equine MC3 Forelimb

    , Article Journal of Equine Veterinary Science ; Volume 78 , 2019 , Pages 94-106 ; 07370806 (ISSN) Mouloodi, S ; Rahmanpanah, H ; Burvill, C ; Davies, H. M. S ; Sharif University of Technology
    W.B. Saunders  2019
    Abstract
    Shape is a key factor in influencing mechanical responses of bones. Considered to be smart viscoelastic and inhomogeneous materials, bones are stimulated to change shape (model and remodel) when they experience changes in the compressive strain distribution. Using reverse engineering techniques via computer-aided design (CAD) is crucial to create a virtual environment to investigate the significance of shape in biomechanical engineering. Nonetheless, data are lacking to quantify the accuracy of generated models and to address errors in finite element analysis (FEA). In the present study, reverse engineering through extrapolating cross-sectional slices was used to reconstruct the diaphysis of... 

    Improvement of upper limb motor control and function after competitive and noncompetitive volleyball exercises in chronic stroke survivors: a randomized clinical trial

    , Article Archives of Physical Medicine and Rehabilitation ; Volume 100, Issue 3 , 2019 , Pages 401-411 ; 00039993 (ISSN) Mandehgary Najafabadi, M ; Azad, A ; Mehdizadeh, H ; Behzadipour, S ; Fakhar, M ; Taghavi Azar Sharabiani, P ; Parnianpour, M ; Taghizadeh, G ; Khalaf, K ; Sharif University of Technology
    W.B. Saunders  2019
    Abstract
    Objectives: To investigate the effects of competitive and noncompetitive volleyball exercises on the functional performance and motor control of the upper limbs in chronic stroke survivors. Design: Randomized clinical trial. Setting: Outpatient rehabilitation center. Participants: Chronic stroke survivors (N=48). Interventions: Participants were randomly assigned to competitive (n=16) or noncompetitive (n=16) volleyball exercise groups (60min/d volleyball exercise+30min/d traditional rehabilitation, 3d/wk for 7wk) and control group (n=16). Main Outcome Measures: Reach and grasp motor control measures were evaluated through kinematic analysis. Functional outcomes were assessed via Motor... 

    Phytochemical characterization and anti-cancer properties of extract of Ephedra foeminea (Ephedraceae) aerial parts

    , Article Tropical Journal of Pharmaceutical Research ; Volume 20, Issue 8 , 2021 , Pages 1675-1681 ; 15965996 (ISSN) Al Saraireh, Y. M ; Youssef, A. M. M ; Alshammari, F. O. F. O ; Al Sarayreh, S. A ; Al Shuneigat, J. M ; Alrawashdeh, H. M ; Mahgoub, S. S ; Sharif University of Technology
    University of Benin  2021
    Abstract
    Purpose: To evaluate the phytochemical profile of methanol extract of Ephedra foeminea and assess its anti-carcer effect on a large set of normal and cancerous cell lines Methods: Extraction of air-dried powder of aerial parts of E. foeminea was carried out with methanol. The bioactive compounds in the extract were determined using gas chromatography/mass spectrometry (GC-MS). The anti-cancer effect of the extract was determined by 3-[4,5-dimethylthiazol-2-yl]-2,5-diphenyltetrazolium bromide (MTT) assay against various types of normal and cancer cell lines. Serial concentrations of plant extract were used, ranging from 7.812 to1000 μg/mL. Doxorubicin (DOX) served as standard drug. The... 

    Fast wavelet-based photoacoustic microscopy

    , Article Journal of the Optical Society of America A: Optics and Image Science, and Vision ; Volume 38, Issue 11 , 2021 , Pages 1673-1680 ; 10847529 (ISSN) Abbasi, H ; Mostafavi, S. M ; Kavehvash, Z ; Sharif University of Technology
    The Optical Society  2021
    Abstract
    A novel photoacoustic microscopy (PAM) structure, based on Haar wavelet patterns, is proposed in this paper. Its main goal is to mitigate the PAM imaging resolution and thus the time of its sampling process without compromising the image quality. Owing to the intrinsic nature of wavelet transform, this structure collects spatial and spectral components simultaneously, and this feature speeds up the sampling process by 33%. The selection of these patterns helps in better control of required conditions, such as multi-resolution imaging, to guarantee adequate image quality in comparison to previous microscopic structures. Simulation results prove the superior quality of the proposed approach... 

    Fast wavelet-based photoacoustic microscopy

    , Article Journal of the Optical Society of America A: Optics and Image Science, and Vision ; Volume 38, Issue 11 , 2021 , Pages 1673-1680 ; 10847529 (ISSN) Abbasi, H ; Mostafavi, S. M ; Kavehvash, Z ; Sharif University of Technology
    The Optical Society  2021
    Abstract
    A novel photoacoustic microscopy (PAM) structure, based on Haar wavelet patterns, is proposed in this paper. Its main goal is to mitigate the PAM imaging resolution and thus the time of its sampling process without compromising the image quality. Owing to the intrinsic nature of wavelet transform, this structure collects spatial and spectral components simultaneously, and this feature speeds up the sampling process by 33%. The selection of these patterns helps in better control of required conditions, such as multi-resolution imaging, to guarantee adequate image quality in comparison to previous microscopic structures. Simulation results prove the superior quality of the proposed approach... 

    Comparing the effects of endurance and resistance trainings on gene expression involved in protein synthesis and degradation signaling pathways of Wistar rat soleus muscle

    , Article Tehran University Medical Journal ; Volume 77, Issue 11 , 2020 , Pages 668-677 Gholipour, M ; Seifabad, M ; Asad, M. R ; Sharif University of Technology
    Tehran University of Medical Sciences  2020
    Abstract
    Background: Skeletal muscle mass, which is regulated by a balance between muscle protein synthesis and degradation, is an important factor for movement to meet everyday needs, especially in pathological conditions and aging. The purpose of the present investigation was to compare the alterations of the gene expression involved in muscle protein synthesis and degradation signaling pathways induced by two exercise training protocols. Methods: Eight weeks old Wistar rats have been assigned to the present experimental study, which was conducted from August 2018 to October 2018 at the animal laboratory of Tehran University. They were randomly divided into two resistance and endurance training...