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    ECG denoising and compression using a modified extended Kalman filter structure

    , Article IEEE Transactions on Biomedical Engineering ; Volume 55, Issue 9 , September , 2008 , Pages 2240-2248 ; 00189294 (ISSN) Sayadi, O ; Shamsollahi, M. B ; Sharif University of Technology
    2008
    Abstract
    This paper presents efficient denoising and lossy compression schemes for electrocardiogram (ECG) signals based on a modified extended Kalman filter (EKF) structure. We have used a previously introduced two-dimensional EKF structure and modified its governing equations to be extended to a 17-dimensional case. The new EKF structure is used not only for denoising, but also for compression, since it provides estimation for each of the new 15 model parameters. Using these specific parameters, the signal is reconstructed with regard to the dynamical equations of the model. The performances of the proposed method are evaluated using standard denoising and compression efficiency measures. For... 

    Dynamic behavior of electric field in the microrings in the presence of Kerr and two-photon absorption

    , Article Proceedings of SPIE - The International Society for Optical Engineering, 7 April 2008 through 10 April 2008, Strasbourg ; Volume 6996 , 2008 ; 0277786X (ISSN) ; 9780819471949 (ISBN) Keyvaninia, S ; Karvar, M ; Bahrampour, A ; Sharif University of Technology
    2008
    Abstract
    This paper a simple semi-analytical model for calculation of the time evolution and spatial variation of the electric field in microring resonators in the presence of The Kerr effect and two-photon absorption (TPA) is presented. The theoretical analysis is based on the delayed feedback model, which is well known in microring theory. The model is applied to the Chalcogenide glass and AlGaAs microrings to study the Kerr and TPA effects on the spatial and temporal variation of electric field respectively across the microring. The effects of microring parameters and input signal shapes on the transient behavior are taken into consideration. It is shown that, the results are in good agreement... 

    Highlighting CAPTCHA

    , Article 2008 Conference on Human System Interaction, HSI 2008, Krakow, 25 May 2008 through 27 May 2008 ; 2008 , Pages 247-250 ; 1424415438 (ISBN); 9781424415434 (ISBN) Shirali Shahreza, M ; Sharif University of Technology
    2008
    Abstract
    There are many sites specially designed for mobile phones. In cases such as the registering in websites, some hackers write programs to make automatic false enrolments which waste the resources of the website. Therefore, it is necessary to distinguish between human users and computer programs. These systems are known as CAPTCHA (Completely Automated Public Turing test to tell Computers and Human Apart). CAPTCHA methods are mainly based on the weak points of OCR (Optical Character Recognition) systems while using them difficult in tools such as PDAs (Personal Digital Assistant) or mobile phones that lack a big keyboard. So the Non-OCR-Based CAPTCHA methods are proposed which are do not need... 

    Vis-NIR hyperspectral imaging coupled with independent component analysis for saffron authentication

    , Article Food Chemistry ; Volume 393 , 2022 ; 03088146 (ISSN) Hashemi Nasab, F. S ; Parastar, H ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    In the present contribution, visible-near infrared hyperspectral imaging (Vis-NIR-HSI) combined with a novel chemometric approach based on mean-filed independent component analysis (MF-ICA) followed by multivariate classification techniques is proposed for saffron authentication and adulteration detection. First, MF-ICA was used to exploit pure spatial and spectral profiles of the components. Then, principal component analysis (PCA) and hierarchical cluster analysis (HCA) were used to find patterns of authentic samples based on their distribution maps. Then, detection of five common plant-derived adulterants of saffron including safflower, saffron style, calendula, rubia and turmeric were... 

    A novel needle trap sorbent based on carbon nanotube-sol-gel for microextraction of polycyclic aromatic hydrocarbons from aquatic media

    , Article Analytica Chimica Acta ; Volume 683, Issue 2 , January , 2011 , Pages 212-220 ; 00032670 (ISSN) Bagheri, H ; Ayazi, Z ; Aghakhani, A ; Sharif University of Technology
    2011
    Abstract
    A new type of composite material based on carbon nanotubes (CNTs) and sol-gel chemistry was prepared and used as sorbent for needle trap device (NTD). The synthesized composite was prepared in a way to disperse CNTs molecules in a sol-gel polymeric network. CNT/silica composites with different CNT doping levels were successfully prepared, and the extraction capability of each composite was evaluated. Effects of surfactant and the oxidation duration of CNTs on the extraction efficiency of synthesized composites were also investigated. The applicability of the synthesized sorbent was examined by developing a method based on needle trap extraction (NTE) and gas chromatography mass spectrometry... 

    Near infrared laser stimulation of human neural stem cells into neurons on graphene nanomesh semiconductors

    , Article Colloids and Surfaces B: Biointerfaces ; Volume 126 , 2015 , Pages 313-321 ; 09277765 (ISSN) Akhavan, O ; Ghaderi, E ; Shirazian, S. A ; Sharif University of Technology
    Abstract
    Reduced graphene oxide nanomeshes (rGONMs), as p-type semiconductors with band-gap energy of ~1. eV, were developed and applied in near infrared (NIR) laser stimulation of human neural stem cells (hNSCs) into neurons. The biocompatibility of the rGONMs in growth of hNSCs was found similar to that of the graphene oxide (GO) sheets. Proliferation of the hNSCs on the GONMs was assigned to the excess oxygen functional groups formed on edge defects of the GONMs, resulting in superhydrophilicity of the surface. Under NIR laser stimulation, the graphene layers (especially the rGONMs) exhibited significant cell differentiations, including more elongations of the cells and higher differentiation of... 

    Silica aerogel coated on metallic wire by phase separation of polystyrene for in–tube solid phase microextraction

    , Article Journal of Chromatography A ; Volume 1500 , 2017 , Pages 69-75 ; 00219673 (ISSN) Baktash, M. Y ; Bagheri, H ; Sharif University of Technology
    Elsevier B.V  2017
    Abstract
    In this research, an attempt was made toward synthesizing a sol–gel–based silica aerogel and its subsequent coating on a copper wire by phase separation of polystyrene. Adaption of this new approach enabled us to coat the metallic wire with powder materials. The use of this method for coating, led to the formation of a porous and thick structure of silica aerogel. The coated wire was placed in a needle and used as the sorbent for in–tube solid phase microextraction of chlorobenzenes (CBs). The superhydrophobicity of sorbent on extraction efficiency was investigated by using different ratios of tetraethylorthosilicate/methyltrimethoxysilane. The surface coated with the prepared silica aerogel... 

    Multifunctional core-shell nanoplatforms (gold@graphene oxide) with mediated NIR thermal therapy to promote miRNA delivery

    , Article Nanomedicine: Nanotechnology, Biology, and Medicine ; Volume 14, Issue 6 , 2018 , Pages 1891-1903 ; 15499634 (ISSN) Assali, A ; Akhavan, O ; Adeli, M ; Razzazan, S ; Dinarvand, R ; Zanganeh, S ; Soleimani, M ; Dinarvand, M ; Atyabi, F ; Sharif University of Technology
    Elsevier Inc  2018
    Abstract
    Recent insights into the nanomedicine have revealed that nanoplatforms enhance the efficacy of carrier in therapeutic applications. Here, multifunctional nanoplatforms were utilized in miRNA-101 delivery and NIR thermal therapy to induce apoptosis in breast cancer cells. Au nanorods (NRs) or nanospheres (NSs) covered with graphene oxide (GO) were prepared and functionalized with polyethylene glycol as a stabilizer and poly-L-arginine (P-L-Arg) as a targeting agent. In nanoplatforms, coupling Au@GO prepared stable structures with higher NIR reactivity. P-L-Arg substantially enhanced the cellular uptake and gene retardation of stuffs coated by them. However, rod-shape nanoplatforms indicated... 

    Chemometrics comparison of gas chromatography with mass spectrometry and comprehensive two-dimensional gas chromatography with time-of-flight mass spectrometry Daphnia magna metabolic profiles exposed to salinity

    , Article Journal of Separation Science ; Volume 41, Issue 11 , 2018 , Pages 2368-2379 ; 16159306 (ISSN) Parastar, H ; Garreta Lara, E ; Campos, B ; Barata, C ; Lacorte, S ; Tauler, R ; Sharif University of Technology
    Wiley-VCH Verlag  2018
    Abstract
    The performances of gas chromatography with mass spectrometry and of comprehensive two-dimensional gas chromatography with time-of-flight mass spectrometry are examined through the comparison of Daphnia magna metabolic profiles. Gas chromatography with mass spectrometry and comprehensive two-dimensional gas chromatography with mass spectrometry were used to compare the concentration changes of metabolites under saline conditions. In this regard, a chemometric strategy based on wavelet compression and multivariate curve resolution–alternating least squares is used to compare the performances of gas chromatography with mass spectrometry and comprehensive two-dimensional gas chromatography with... 

    The field effect transistor DNA biosensor based on ITO nanowires in label-free hepatitis B virus detecting compatible with CMOS technology

    , Article Biosensors and Bioelectronics ; Volume 105 , 15 May , 2018 , Pages 58-64 ; 09565663 (ISSN) Shariati, M ; Sharif University of Technology
    Elsevier Ltd  2018
    Abstract
    In this paper the field-effect transistor DNA biosensor for detecting hepatitis B virus (HBV) based on indium tin oxide nanowires (ITO NWs) in label free approach has been fabricated. Because of ITO nanowires intensive conductance and functional modified surface, the probe immobilization and target hybridization were increased strongly. The high resolution transmission electron microscopy (HRTEM) measurement showed that ITO nanowires were crystalline and less than 50 nm in diameter. The single-stranded hepatitis B virus DNA (SS-DNA) was immobilized as probe on the Au-modified nanowires. The DNA targets were measured in a linear concentration range from 1fM to 10 µM. The detection limit of... 

    Development of nanocrystalline TiO2-Er2O3 and TiO2-Ta2O5 thin film gas sensors: Controlling the physical and sensing properties

    , Article Sensors and Actuators, B: Chemical ; Volume 141, Issue 1 , 2009 , Pages 76-84 ; 09254005 (ISSN) Mohammadi, M. R ; Fray, D. J ; Sharif University of Technology
    2009
    Abstract
    A systematic comparison of single and binary metal oxide TiO2, TiO2-Er2O3 and TiO2-Ta2O5 thin film gas sensors with nanocrystalline and mesoporous microstructure, prepared by sol-gel route, was conducted. The gas sensitivity was increased by secondary phase introduction into TiO2 film via two mechanisms, firstly due to the inhibition of anatase-to-rutile transformation, since the anatase phase accommodates larger amounts of adsorbed oxygen, and secondly due to the retardation of grain growth, since the higher surface area provides more active sites for gas molecule adsorption. The binary metal oxide gas sensors exhibited a remarkable response towards low concentrations of CO and NO2 gases at... 

    A foreign body response-on-a-chip platform

    , Article Advanced Healthcare Materials ; Volume 8, Issue 4 , 2019 ; 21922640 (ISSN) Sharifi, F ; Htwe, S. S ; Righi, M ; Liu, H ; Pietralunga, A ; Yesil Celiktas, O ; Maharjan, S ; Cha, B. H ; Shin, S. R ; Dokmeci, M. R ; Vrana, N. E ; Ghaemmaghami, A. M ; Khademhosseini, A ; Zhang, Y. S ; Sharif University of Technology
    Wiley-VCH Verlag  2019
    Abstract
    Understanding the foreign body response (FBR) and desiging strategies to modulate such a response represent a grand challenge for implant devices and biomaterials. Here, the development of a microfluidic platform is reported, i.e., the FBR-on-a-chip (FBROC) for modeling the cascade of events during immune cell response to implants. The platform models the native implant microenvironment where the implants are interfaced directly with surrounding tissues, as well as vasculature with circulating immune cells. The study demonstrates that the release of cytokines such as monocyte chemoattractant protein 1 (MCP-1) from the extracellular matrix (ECM)-like hydrogels in the bottom tissue chamber... 

    The geometrical characteristics of nickel-based metal organic framework on its entrapment capability

    , Article Journal of Chromatography A ; Volume 1610 , 2020 Javanmardi, H ; Abbasi, A ; Bagheri, H ; Sharif University of Technology
    Elsevier B.V  2020
    Abstract
    Here, a three dimensional nickel–based metal organic framework (MOF) was synthesized via solvothermal and room temperature protocols. In order to study the effects of the synthesis conditions on the physical properties such as pore sizes and shapes of the prepared MOFs, their extraction capabilities were examined. Both MOFs were characterized by Fourier transform infrared spectroscopy, powder X-ray diffraction, scanning electron microscopy, Brunauer–Emmett–Teller and thermogravimetric analyses. Brilliant properties such as porous structure, high surface area and considerable thermal stability make them reasonable candidates to be employed as efficient extractive phases. The efficiency of the... 

    Challenges and future prospects for the delivery of biologics: oral mucosal, pulmonary, and transdermal routes

    , Article AAPS Journal ; Volume 19, Issue 3 , 2017 , Pages 652-668 ; 15507416 (ISSN) Morales, J. O ; Fathe, K. R ; Brunaugh, A ; Ferrati, S ; Li, S ; Montenegro Nicolini, M ; Mousavikhamene, Z ; McConville, J. T ; Prausnitz, M. R ; Smyth, H. D. C ; Sharif University of Technology
    Springer New York LLC  2017
    Abstract
    Biologic products are large molecules such as proteins, peptides, nucleic acids, etc., which have already produced many new drugs for clinical use in the last decades. Due to the inherent challenges faced by biologics after oral administration (e.g., acidic stomach pH, digestive enzymes, and limited permeation through the gastrointestinal tract), several alternative routes of administration have been investigated to enable sufficient drug absorption into systemic circulation. This review describes the buccal, sublingual, pulmonary, and transdermal routes of administration for biologics with relevant details of the respective barriers. While all these routes avoid transit through the...