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    Kinetics of Animal Cell Adhesion Mediated by the Diffusion of Cell Wall Receptors: Effect of Mechanical Stiffness and Electrical Charges of the Substrate

    , M.Sc. Thesis Sharif University of Technology Samadi Dooki, Aref (Author) ; Mohammadi Shoja, Hossein (Supervisor)
    Abstract
    Viability and proliferation of cells in cell culture mainly depends on i) cell culture medium, ii) cell-cell interaction, and iii) the supporting scaffold. Among these factors, and within recent years, surface and mechanical properties of the supporting ECM has attracted many researchers. Experiment results show that the animal cell adhesion is accelerated on stiffer scaffolds. Electrical charge of the scaffold is also a determinant term in the kinetics of adhesion and on a relatively charged scaffold, one can expect an increment in kinetics of adhesion front movement. This is due to the natural negative charges of the cell wall membrane. In this thesis, an analytical model is proposed to... 

    Simulation of a Simple Model of Endothelial Cell Using Dissipative Particle Dynamics Method

    , M.Sc. Thesis Sharif University of Technology Kiyoumarsi Oskouei, Amir (Author) ; Saeedi, Mohammad Saeed (Supervisor) ; Firoozabadi, Bahar (Co-Advisor)
    Abstract
    Endothelium is the interior layer of an artery made up of tremendous number of endothelial cells which are located side by side. Finding the effective parameters that cause the cells to obtain mechanical strength in different morphologies is a major effort in cell engineering studies. In this work a numerical model for endothelial cells is developed. This model has included cell's plasma membrane (the outer membrane of the cell), nucleus and cytoskeleton main components including intermediate and actin filaments as well as microtubules. The model has been validated by simulating the adhesion of the cells to a flat substrate and also atomic force microscopy (AFM) experiments. The two most... 

    Synthesis and characterization of gold nanotube/nanowire-polyurethane composite based on castor oil and polyethylene glycol

    , Article Materials Science and Engineering C ; Vol. 42 , 2014 , pp. 341-349 ; ISSN: 09284931 Ganji, Y ; Kasra,M ; Salahshour Kordestani, S ; Bagheri Hariri, M ; Sharif University of Technology
    Abstract
    Gold nanotubes/nanowires (GNT/NW) were synthesized by using the template-assisted electrodeposition technique and mixed with castor oil-polyethylene glycol based polyurethane (PU) to fabricate porous composite scaffolds for biomedical application. 100 and 50 ppm of GNT/NW were used to synthesize composites. The composite scaffolds were characterized by Fourier transform infrared spectroscopy, dynamic mechanical thermal analysis, differential scanning calorimetry, and scanning electron microscopy. Cell attachment on polyurethane-GNT/NW composites was investigated using fat-derived mesenchymal stem cells. Addition of 50 or 100 ppm GNT/NW had significant effects on thermal, mechanical, and cell... 

    Modification of rock/fluid and fluid/fluid interfaces during MEOR processes, using two biosurfactant producing strains of Bacillus stearothermophilus SUCPM#14 and Enterobacter cloacae: A mechanistic study

    , Article Colloids and Surfaces B: Biointerfaces ; Vol. 117 , May , 2014 , pp. 457-465 ; ISSN: 09277765 Sarafzadeh, P ; Zeinolabedini Hezave, A ; Mohammadi, S ; Niazi, A ; Ayatollahi, S ; Sharif University of Technology
    Abstract
    During any microbial enhanced oil recovery process, both cells and the metabolic products of bacteria govern the tertiary oil recovery efficiency. However, very accurate examination is needed to find the functionality of these tiny creatures at different reservoir conditions. In this regard, the effect of cell structure on ultimate microbial recovery efficiency which is the most dominant mechanism based on the microorganism types (gram-negative or gram-positive) was systematically investigated. At the first stage, possible different active mechanisms using Bacillus stearothermophilus SUCPM#14 strain were tested using specially designed injection protocol, in situ and ex situ core flooding... 

    Tissue growth into three-dimensional composite scaffolds with controlled micro-features and nanotopographical surfaces

    , Article Journal of Biomedical Materials Research - Part A ; Volume 101, Issue 10 , 2013 , Pages 2796-2807 ; 15493296 (ISSN) Tamjid, E ; Simchi, A ; Dunlop, J. W. C ; Fratzl, P ; Bagheri, R ; Vossoughi, M ; Sharif University of Technology
    2013
    Abstract
    Controlling topographic features at all length scales is of great importance for the interaction of cells with tissue regenerative materials. We utilized an indirect three-dimensional printing method to fabricate polymeric scaffolds with pre-defined and controlled external and internal architecture that had an interconnected structure with macro- (400-500 μm) and micro- (∼25 μm) porosity. Polycaprolactone (PCL) was used as model system to study the kinetics of tissue growth within porous scaffolds. The surface of the scaffolds was decorated with TiO2 and bioactive glass (BG) nanoparticles to the better match to nanoarchitecture of extracellular matrix (ECM). Micrometric BG particles were... 

    Fabrication of biocompatible titanium scaffolds using space holder technique

    , Article Journal of Materials Science: Materials in Medicine ; Volume 23, Issue 10 , 2012 , Pages 2483-2488 ; 09574530 (ISSN) Dezfuli, S. N ; Sadrnezhaad, S. K ; Shokrgozar, M. A ; Bonakdar, S ; Sharif University of Technology
    Springer  2012
    Abstract
    Open-pore titanium scaffolds were fabricated by sintering of compressed mixtures of TiH1.924 and urea. Spherical and irregular shaped space holders were used to investigate the effect of pore shape on cellular behavior. After removal of the space holder, the shape of the spacers was replicated to the pores. Average diameter of the pores was in the range of 300-600 lm. SEM images showed that titanium hydride resulted in higher surface roughness and larger micro porosities than pure titanium. In vitro evaluationswere carried out by using MTT assay, measuring alkaline phosphatase activity and alizarin red staining in flow perfusion bioreactor for cell culture. Observations revealed excellent... 

    Recent progress in inorganic and composite coatings with bactericidal capability for orthopaedic applications

    , Article Nanomedicine: Nanotechnology, Biology, and Medicine ; Volume 7, Issue 1 , Feb , 2011 , Pages 22-39 ; 15499634 (ISSN) Simchi, A ; Tamjid, E ; Pishbin, F ; Boccaccini, A. R ; Sharif University of Technology
    Abstract
    This review covers the most recent developments of inorganic and organic-inorganic composite coatings for orthopedic implants, providing the interface with living tissue and with potential for drug delivery to combat infections. Conventional systemic delivery of drugs is an inefficient procedure that may cause toxicity and may require a patient's hospitalization for monitoring. Local delivery of antibiotics and other bioactive molecules maximizes their effect where they are required, reduces potential systemic toxicity and increases timeliness and cost efficiency. In addition, local delivery has broad applications in combating infection-related diseases. Polymeric coatings may present some... 

    Preparation and biological evaluation of radiolabeled-folate embedded superparamagnetic nanoparticles in wild-type rats

    , Article Journal of Radioanalytical and Nuclear Chemistry ; Volume 287, Issue 1 , January , 2011 , Pages 119-127 ; 02365731 (ISSN) Jalilian, A. R ; Hosseini Salekdeh, S. L ; Mahmoudi, M ; Yousefnia, H ; Majdabadi, A ; Pouladian, M ; Sharif University of Technology
    2011
    Abstract
    In this study, superparamagnetic iron oxide nanoparticles (SPION) embedded by folic acid (SPION-folate) were prepared by a modified co-precipitation method. The structure, size, morphology, magnetic property and relaxivity of the SPION-folate were characterized systematically by means of XRD, VSM, HRSEM and TEM and the interaction between folate and iron oxide (Fe3O 4) was characterized by FT-IR. The particle size was shown to be ≈5-10 nm. To ensure biocompatibility, the interaction of these SPION with mouse connective tissue cells (adhesive) was investigated using an MTT assay. Consequently, gallium-67 labeled nanoparticles ([67Ga]-SPION-folate) were prepared using 67Ga with a high labeling... 

    Fabrication of a highly ordered hierarchically designed porous nanocomposite via indirect 3D printing: Mechanical properties and in vitro cell responses

    , Article Materials and Design ; Volume 88 , 2015 , Pages 924-931 ; 02641275 (ISSN) Tamjid, E ; Simchi, A ; Sharif University of Technology
    Elsevier Ltd  2015
    Abstract
    Design and development of biodegradable scaffolds with highly uniform and controlled internal structure that stimulate tissue regeneration are the focus of many studies. The aim of this work is to apply a modified three-dimensional (3D) printing process to fabricate polymer-matrix composites with controlled internal architecture. Computationally-designed plaster molds with various pore sizes in the range of 300-800. μm were prepared by employing 3D printing of a water-based binder. The molds were converted to ε-polycaprolactone (PCL) and PCL/bioactive glass (BG) composite scaffolds by solvent casting and freeze drying methods. Optical and electron microscopy studies revealed that the pore... 

    Effect of intermediate nickel layer on seal strength and chemical compatibility of glass and ferritic stainless steel in oxidizing environment for solid oxide fuel cells

    , Article International Journal of Hydrogen Energy ; Volume 40, Issue 46 , 2015 , Pages 16434-16442 ; 03603199 (ISSN) Fakouri Hasanabadi, M ; Nemati, A ; Kokabi, A. H ; Sharif University of Technology
    Elsevier Ltd  2015
    Abstract
    The effects of intermediate nickel layer on seal strength and chemical compatibility of seal glass and interconnect materials for solid oxide fuel cells (SOFCs) were investigated. Two types of samples (metal/glass/metal sandwiches and glass coated metals) were prepared with the sheet of AISI 430 (nickel plated and uncoated) and slurry of compliant silicate sealing glass (SCN-1). The joined and coated samples were heated at 850 °C for different time durations (0.5-100 h). Tensile and impact tests were performed and SEM micrographs were used to analyze the glass/metal interaction. The results indicate that nickel plated AISI 430 shows higher adhesion strength at short durations of heating due... 

    Antibiotic-loaded chitosan–Laponite films for local drug delivery by titanium implants: cell proliferation and drug release studies

    , Article Journal of Materials Science: Materials in Medicine ; Volume 26, Issue 12 , December , 2015 ; 09574530 (ISSN) Ordikhani, F ; Dehghani, M ; Simchi, A ; Sharif University of Technology
    Kluwer Academic Publishers  2015
    Abstract
    Abstract: In this study, chitosan–Laponite nanocomposite coatings with bone regenerative potential and controlled drug-release capacity are prepared by electrophoretic deposition technique. The controlled release of a glycopeptide drug, i.e. vancomycin, is attained by the intercalation of the polymer and drug macromolecules into silicate galleries. Fourier-transform infrared spectrometry reveals electrostatic interactions between the charged structure of clay and the amine and hydroxyl groups of chitosan and vancomycin, leading to a complex positively-charged system with high electrophoretic mobility. By applying electric field the charged particles are deposited on the surface of titanium... 

    The effect of the physical properties of the substrate on the kinetics of cell adhesion and crawling studied by an axisymmetric diffusion-energy balance coupled model

    , Article Soft Matter ; Volume 11, Issue 18 , Mar , 2015 , Pages 3693-3705 ; 1744683X (ISSN) Samadi Dooki, A ; Shodja, H. M ; Malekmotiei, L ; Sharif University of Technology
    Royal Society of Chemistry  2015
    Abstract
    In this paper an analytical approach to study the effect of the substrate physical properties on the kinetics of adhesion and motility behavior of cells is presented. Cell adhesion is mediated by the binding of cell wall receptors and substrate's complementary ligands, and tight adhesion is accomplished by the recruitment of the cell wall binders to the adhesion zone. The binders' movement is modeled as their axisymmetric diffusion in the fluid-like cell membrane. In order to preserve the thermodynamic consistency, the energy balance for the cell-substrate interaction is imposed on the diffusion equation. Solving the axisymmetric diffusion-energy balance coupled equations, it turns out that... 

    Fabrication and characterization of conductive chitosan/gelatin-based scaffolds for nerve tissue engineering

    , Article International Journal of Biological Macromolecules ; Volume 74 , 2015 , Pages 360-366 ; 01418130 (ISSN) Baniasadi, H ; Ramazani S. A., A ; Mashayekhan, S ; Sharif University of Technology
    Abstract
    This paper reports on the development of conductive porous scaffolds by incorporating conductive polyaniline/graphene (PAG) nanoparticles into a chitosan/gelatin matrix for its potential application in peripheral nerve regeneration. The effect of PAG content on the various properties of the scaffold is investigated and the results showed that the electrical conductivity and mechanical properties increased proportional to the increase in the PAG loading, while the porosity, swelling ratio and in vitro biodegradability decreased. In addition, the biocompatibility was evaluated by assessing the adhesion and proliferation of Schwann cells on the prepared scaffolds using SEM and MTT assay,... 

    Advances in skin regeneration: application of electrospun scaffolds

    , Article Advanced Healthcare Materials ; Volume 4, Issue 8 , 2015 , Pages 1114-1133 ; 21922640 (ISSN) Norouzi, M ; Boroujeni, S. M ; Omidvarkordshouli, N ; Soleimani, M ; Sharif University of Technology
    Wiley-VCH Verlag  2015
    Abstract
    The paucity of cellular and molecular signals essential for normal wound healing makes severe dermatological ulcers stubborn to heal. The novel strategies of skin regenerative treatments are focused on the development of biologically responsive scaffolds accompanied by cells and multiple biomolecules resembling structural and biochemical cues of the natural extracellular matrix (ECM). Electrospun nanofibrous scaffolds provide similar architecture to the ECM leading to enhancement of cell adhesion, proliferation, migration and neo tissue formation. This Review surveys the application of biocompatible natural, synthetic and composite polymers to fabricate electrospun scaffolds as skin... 

    Thermoplastic starch/ethylene vinyl alcohol/forsterite nanocomposite as a candidate material for bone tissue engineering

    , Article Materials Science and Engineering C ; Volume 69 , 2016 , Pages 301-310 ; 09284931 (ISSN) Mahdieh, Z ; Bagheri, R ; Eslami, M ; Amiri, M ; Shokrgozar, M. A ; Mehrjoo, M ; Sharif University of Technology
    Elsevier Ltd 
    Abstract
    Recently, biodegradable polymers such as starch based blends have been well renowned in the biomedical field. Studies have considered them suitable for bone scaffolds, bone cements, tissue engineering scaffolds, drug delivery systems and hydrogels. The aim of this study was to synthesize nanocomposite biomaterial consisting a blend of thermoplastic starch and ethylene vinyl alcohol as the polymer matrix, and nano-structured forsterite as the ceramic reinforcing phase for bone tissue engineering applications. Furthermore, vitamin E was applied as a thermal stabilizer during melt compounding. Extrusion and injection molding were incorporated for melt blending and shaping of samples,... 

    Biodegradable polyurethane acrylate/HEMA-grafted nanodiamond composites with bone regenerative potential applications: Structure, mechanical properties and biocompatibility

    , Article RSC Advances ; Volume 6, Issue 11 , 2016 , Pages 8743-8755 ; 20462069 (ISSN) Alishiri, M ; Shojaei, A ; Abdekhodaie, M. J ; Sharif University of Technology
    Royal Society of Chemistry 
    Abstract
    The present study demonstrates HEMA-grafted nanodiamond (ND-HEMA)/acrylate-terminated polyurethane-acrylate diluents (APUA) composites as promising materials for bone implant applications. Neat APUA and APUA composites containing ND-HEMA at different loadings up to 2 wt% were prepared by an in situ polymerization method. Morphological analysis demonstrated that ND-HEMAs were actually in the form of tightly bound aggregates which led to formation of big agglomerates at a concentration of 2 wt%. It was also suggested that ND-HEMAs were preferentially localized in the continuous soft domain of APUA; however it interacted by both soft and hard domains. Moreover, ND-HEMAs caused considerable... 

    Electrospinning of nanodiamond-modified polysaccharide nanofibers with physico-mechanical properties close to natural skins

    , Article Marine Drugs ; Volume 14, Issue 7 , 2016 ; 16603397 (ISSN) Mahdavi, M ; Mahmoudi, N ; Rezaie Anaran, F ; Simchi, A ; Sharif University of Technology
    MDPI AG 
    Abstract
    Electrospinning of biopolymers has gained significant interest for the fabrication of fibrous mats for potential applications in tissue engineering, particularly for wound dressing and skin regeneration. In this study, for the first time, we report successful electrospinning of chitosan-based biopolymers containing bacterial cellulous (33 wt %) and medical grade nanodiamonds (MND) (3 nm; up to 3 wt %). Morphological studies by scanning electron microscopy showed that long and uniform fibers with controllable diameters from 80 to 170 nm were prepared. Introducing diamond nanoparticles facilitated the electrospinning process with a decrease in the size of fibers. Fourier transform infrared... 

    Fabrication of porous gelatin-chitosan microcarriers and modeling of process parameters via the RSM method

    , Article International Journal of Biological Macromolecules ; Volume 88 , 2016 , Pages 288-295 ; 01418130 (ISSN) Karimian, S. A. M ; Mashayekhan, S ; Baniasadi, H ; Sharif University of Technology
    Elsevier B.V 
    Abstract
    Porous gelatin-chitosan microcarriers (MCs) with the size of 350 ± 50 μm were fabricated with blends of different gelatin/chitosan (G/C) weight ratio using an electrospraying technique. Response surface methodology (RSM) was used to study the quantitative influence of process parameters, including blend ratio, voltage, and syringe pump flow rate, on MCs diameter and density. In the following, MCs of the same diameter and different G/C weight ratio (1, 2, and 3) were fabricated and their porosity and biocompatibility were investigated via SEM images and MTT assay, respectively. The results showed that mesenchymal stem cells (MSCs) could attach, proliferate, and spread on fabricated porous MCs... 

    Neuroplasticity in dynamic neural networks comprised of neurons attached to adaptive base plate

    , Article Neural Networks ; Volume 75 , 2016 , Pages 77-83 ; 08936080 (ISSN) Joghataie, A ; Shafiei Dizaji, M ; Sharif University of Technology
    Elsevier Ltd  2016
    Abstract
    In this paper, a learning algorithm is developed for Dynamic Plastic Continuous Neural Networks (DPCNNs) to improve their learning of highly nonlinear time dependent problems. A DPCNN is comprised of a base medium, which is nonlinear and plastic, and a number of neurons that are attached to the base by wire-like connections similar to perceptrons. The information is distributed within DPCNNs gradually and through wave propagation mechanism. While a DPCNN is adaptive due to its connection weights, the material properties of its base medium can also be adjusted to improve its learning. The material of the medium is plastic and can contribute to memorizing the history of input-response similar... 

    A comprehensive evaluation between the efficiency of different treatments in modifying the properties and behavior of magnesium alloys as degradable biomaterials

    , Article Materials and Corrosion ; Volume 68, Issue 9 , 2017 , Pages 995-1003 ; 09475117 (ISSN) Homayun, B ; Afshar, A ; Sharif University of Technology
    Abstract
    The addition of alloying elements to magnesium leads to microstructural refinement and improves its properties. However, this strategy is accompanied by another concurrent phenomenon − that is − intergranular segregation and the formation of secondary phases in grain boundaries, deteriorating the properties. In this work, the efficacy of two main factors on modifying the mechanical properties and corrosion behavior of Mg-4Zn-1Al-0.2Ca alloy was investigated separately: 1) dissolution of secondary phases; and 2) grain refinement. Based on the results, heat treatment of the as-cast alloy can increase the UTS from 174.4 to 213.2 MPa, decrease the corrosion current density from 81 to 49 μA/cm2,...