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    Design and Implementation of a Face Model in Video-realistic Speech Animation for Farsi Language

    , M.Sc. Thesis Sharif University of Technology Ghasemi Naraghi, Zeinab (Author) ; Jamzad, Mansour (Supervisor)
    Abstract
    With increasing use of computers in everyday life, improved communication between machines and human is needed. To make a right communication and understand a humankind face which is made in a graphical environment, implementing the audio and visual projects like lip reading, audio and visual speech recognition and lip modelling needed. The main goal in this project is natural representation of strings of lip movements for Farsi language. Lack of a complete audio and visual database for this application in Farsi language made us provide a new complete Farsi database for this project that is called SFAVD. It is a unique audio and visual database which covers the most applicable words, all... 

    Face Motion Capture using a Regular Camera and Constructing face 3D Graphical Model

    , M.Sc. Thesis Sharif University of Technology Foroughi, Faraz (Author) ; Jamzad, Mansour (Supervisor)
    Abstract
    In this project, using one regular color camera, a video is captured of an actor’s face. Using machine vision and without any kind of markers on the actor’s face, this video is processed to extract the locations of some desired points on the face of the actor. Then these points are mapped to corresponding points on a 3D graphical model of a face, so that a realistic animation of facial movements is achieved. The extracted points, including points on the eyebrows, eyes and lips are the most important ones for the purpose of facial animation. To extract these points, in each region several methods are implemented and studied to find the best method, finally for extracting points on the... 

    Enhancement of Animal Tracking by Means of Wireless Sensor Network Using Machine Learning Technique

    , M.Sc. Thesis Sharif University of Technology Ayatollahi, Azarm (Author) ; Bagheri Shouraki, Saeed (Supervisor) ; Ghorshi, Mohammad Ali (Co-Advisor)
    Abstract
    A Wireless Sensor Network is one of the attended research context that is used to meet different requirements of a wide range of applications. One of the usages of WSNs is in Animal Tracking. Many Animal Tracking methods have weaknesses that can be enhanced. By considering WSN properties and many different usages of Machine Learning techniques reported in a variety of fields and considering Animal Tracking methods characteristics, WSNs can be improved by applying Machine Learning techniques. The main goal of this thesis is to show that with help of Machine Learning techniques, performance of Animal Tracking by means of Wireless Sensor Networks increases. To fulfill this goal, we first... 

    The Supply Chain Network Design for Agricultural and Livestock Products and Related Industries

    , M.Sc. Thesis Sharif University of Technology Abouchenari, Mousareza (Author) ; Akbari Jokar, Mohammad Reza (Supervisor)
    Abstract
    Given the importance and the need to strengthen the agricultural sector within the national development strategy, it is necessary to meet the different needs of the agricultural sector in different areas. Since the activities and diversify the agricultural sector, the industry must be tailored to geographic locations.Unlike the studies so far, we in this research in order to achieve a proper and efficient planning, effective dimensions of the chain as an integrated review and a network of supply chain, production and distribution of agricultural products, livestock and processing industries have designed, so that we can have a comprehensive plan for each of the sectors of agriculture,... 

    Design, Fabrication, and Experimental Study of a Flexible Cardiac Stabilizer for Beating Heart Robotic Surgery

    , M.Sc. Thesis Sharif University of Technology Houshmand, Arvin (Author) ; Farahmand, Farzam (Supervisor)
    Abstract
    A popular way for performing minimally invasive heart surgery is to use cardiac stabilizers that fix the heart during surgery. In the recent years several research works have been conducted to develop effective cardiac stabilizers. While these developments have attempted to improve fixation of the heart, there are reports indicating that a rigid cardiac stabilization may induce injury to heart muscle tissues due to restricting the heart motion in all directions. A more efficient approach than rigid cardiac stabilization might be to use a flexible cardiac stabilizer in combination with a surgical robot having motion compensation capability. The scope of this research is designing a device to... 

    Heart Motion Measurement and Prediction for Robotic Assisted Beating Heart Surgery

    , Ph.D. Dissertation Sharif University of Technology Mansouri, Saeed (Author) ; Farahmand, Farzam (Supervisor) ; Vossoughi, Gholamreza (Supervisor)
    Abstract
    An essential requirement for performing robotic assisted surgery on a freely beating heart is a prediction algorithm which can estimate the future heart trajectory with a high accuracy in a long horizon. The main objective of this research was measurement and prediction of the heart motion for robotic assisted beating heart surgery. In this study, first the feasibility of a stereo infrared tracking system for measuring the free beating heart motion was investigated by experiments on a heart motion simulator. Simulator experiments revealed a high tracking accuracy when the capturing times were synchronized and the tracker pointed at the target from an appropriate distance.Then, the heart... 

    Animation–based Gamification of Children

    , M.Sc. Thesis Sharif University of Technology Farzinnejad, Forouzan (Author) ; Habibi, Jafar (Supervisor) ; Hemmatyar, Ali Mohammad Afshin (Supervisor)
    Abstract
    Creative play is both engaging and educational. Finger painting, building with blocks, drawing, or dressing up – all such activities intimately link imagination and self expression with exploration and problem solving. With creative play, children have fun while learning new skills and enhancing their understanding of the world. However, with the popularity and ubiquity of digital devices, an increasing amount of play time happens in the digital world, such as with video games where the link to creativity is sometimes questionable. Instead of creative play, children simply play. In this thesis, we describe the design, development and preliminary evaluation of a novel animation tool for... 

    Synthesis and characterization of gold nanotube/nanowire-polyurethane composite based on castor oil and polyethylene glycol

    , Article Materials Science and Engineering C ; Vol. 42 , 2014 , pp. 341-349 ; ISSN: 09284931 Ganji, Y ; Kasra,M ; Salahshour Kordestani, S ; Bagheri Hariri, M ; Sharif University of Technology
    Abstract
    Gold nanotubes/nanowires (GNT/NW) were synthesized by using the template-assisted electrodeposition technique and mixed with castor oil-polyethylene glycol based polyurethane (PU) to fabricate porous composite scaffolds for biomedical application. 100 and 50 ppm of GNT/NW were used to synthesize composites. The composite scaffolds were characterized by Fourier transform infrared spectroscopy, dynamic mechanical thermal analysis, differential scanning calorimetry, and scanning electron microscopy. Cell attachment on polyurethane-GNT/NW composites was investigated using fat-derived mesenchymal stem cells. Addition of 50 or 100 ppm GNT/NW had significant effects on thermal, mechanical, and cell... 

    Antitumor effect of therapeutic HPV DNA vaccines with chitosan-based nanodelivery systems

    , Article Journal of Biomedical Science ; Vol. 21, issue. 1 , July , 2014 ; ISSN: 10217770 Tahamtan, A ; Ghaemi, A ; Gorji, A ; Kalhor, H. R ; Sajadian, A ; Tabarraei, A ; Moradi, A ; Atyabi, F ; Kelishadi, M ; Sharif University of Technology
    Abstract
    Cervical cancer is the second-most-common cause of malignancies in women worldwide, and the oncogenic activity of the human papilloma virus types (HPV) E7 protein has a crucial role in anogenital tumors. In this study, we have designed a therapeutic vaccine based on chitosan nanodelivery systems to deliver HPV-16 E7 DNA vaccine, considered as a tumor specific antigen for immunotherapy of HPV-associated cervical cancer. We have developed a Nano-chitosan (NCS) as a carrier system for intramuscular administration using a recombinant DNA vaccine expressing HPV-16 E7 (NCS-DNA E7 vaccine). NCS were characterized in vitro for their gene transfection ability. Results: The transfection of CS-pEGFP... 

    Chemometrics-assisted effect-directed analysis of crude and refined oil using comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry

    , Article Environmental Science and Technology ; Vol. 48, issue. 5 , 2014 , pp. 3074-3083 ; ISSN: 0013936X Radovic, J. R ; Thomas, K. V ; Parastar, H ; Diez, S ; Tauler, R ; Bayona, J. M ; Sharif University of Technology
    Abstract
    An effect-directed analysis (EDA) of fresh and artificially weathered (evaporated, photooxidized) samples of North Sea crude oil and residual heavy fuel oil is presented. Aliphatic, aromatic, and polar oil fractions were tested for the presence of aryl hydrocarbon receptor (AhR) agonist and androgen receptor (AR) antagonist, demonstrating for the first time the AR antagonist effects in the aromatic and, to a lesser extent, polar fractions. An extension of the typical EDA strategy to include an N-way partial least-squares (N-PLS) model capable of relating the comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry (GC × GC-TOFMS) data set to the bioassay data... 

    In vitro biocompatibility evaluations of hyperbranched polyglycerol hybrid nanostructure as a candidate for nanomedicine applications

    , Article Journal of Materials Science: Materials in Medicine ; Vol. 25, issue. 2 , 2014 , pp. 499-506 ; ISSN: 09574530 Zarrabi, A ; Shokrgozar, M. A ; Vossoughi, M ; Farokhi, M ; Sharif University of Technology
    Abstract
    In the present study, a detailed biocompatibility testing of a novel class of hybrid nanostructure based on hyperbranched polyglycerol and β-cyclodextrin is conducted. This highly water soluble nanostructure with size of less than 10 nm, polydispersity of less than 1.3, chemical tenability and highly branched architecture with the control over branching structure could be potentially used as a carrier in drug delivery systems. To this end, extensive studies in vitro and in vivo conditions have to be demonstrated. The in vitro studies include in vitro cytotoxicity tests; MTT and Neutral Red assay as an indicator of mitochondrial and lysosomal function, and blood biocompatibility tests such as... 

    Three-dimensional simulation of urine concentrating mechanism in a functional unit of rat outer medulla. I. Model structure and base case results

    , Article Mathematical Biosciences ; Vol. 258 , 2014 , pp. 44-56 ; ISSN: 00255564 Sohrabi, S ; Saidi, M. S ; Saadatmand, M ; Banazadeh, M. H ; Firoozabadi, B ; Sharif University of Technology
    Abstract
    The urine formation and excretion system have long been of interest for mathematicians and physiologists to elucidate the obscurities within the process happens in renal tissue. In this study, a novel three-dimensional approach is utilized for modeling the urine concentrating mechanism in rat renal outer medulla which is essentially focused on demonstrating the significance of tubule's architecture revealed in anatomic studies and physiological literature. Since nephrons and vasculatures work interdependently through a highly structured arrangement in outer medulla which is dominated by vascular bundles, a detailed functional unit is proposed based on this specific configuration.... 

    Simulation of blood oxygenation in capillary membrane oxygenators using modified sulfite solution

    , Article Biophysical Chemistry ; Vol. 195, issue , Dec , 2014 , p. 8-15 Tabesh, H ; Amoabediny, G ; Rasouli, A ; Ramedani, A ; Poorkhalil, A ; Kashefi, A ; Mottaghy, K ; Sharif University of Technology
    Abstract
    Blood oxygenation is the main performance characteristic of capillary membrane oxygenators (CMOs). Handling of natural blood in in vitro investigations of CMOs is quite complex and time-consuming. Since the conventional blood analog fluids (e.g. water/glycerol) lack a substance with an affinity to capture oxygen comparable to hemoglobin's affinity, in this study a novel approach using modified sulfite solution is proposed to address this challenge. The solution comprises sodium sulfite as a component, simulating the role of hemoglobin in blood oxygenation. This approach is validated by OTR (oxygen transfer rate) measured using native porcine blood, in two types of commercially available... 

    Disc size markedly influences concentration profiles of intravenously administered solutes in the intervertebral disc: A computational study on glucosamine as a model solute

    , Article European Spine Journal ; Vol. 23, issue. 4 , April , 2014 , p. 715-723 Motaghinasab, S ; Shirazi-Adl, A ; Parnianpour, M ; Urban, J. P. G ; Sharif University of Technology
    Abstract
    Purpose: Tests on animals of different species with large differences in intervertebral disc size are commonly used to investigate the therapeutic efficacy of intravenously injected solutes in the disc. We hypothesize that disc size markedly affects outcome. Methods: Here, using a small non-metabolized molecule, glucosamine (GL) as a model solute, we calculate the influence of disc size on transport of GL into rat, rabbit, dog and human discs for 10 h post intravenous-injection. We used transient finite element models and considered an identical GL supply for all animals. Results: Huge effects of disc size on GL concentration profiles were found. Post-injection GL concentration in the rat... 

    SFAVD: Sharif farsi audio visual database

    , Article IKT 2013 - 2013 5th Conference on Information and Knowledge Technology, Shiraz, Iran ; 2013 , Pages 417-421 ; 9781467364904 (ISBN) Naraghi, Z ; Jamzad, M ; Sharif University of Technology
    2013
    Abstract
    With increasing use of computers in everyday life, improved communication between machines and human is needed. To make a right communication and understand a humankind face which is made in a graphical environment, implementing the audio and visual projects like lip reading, audio and visual speech recognition and lip making are needed. Lack of a complete audio and visual database for this application in Farsi language made us provide a new complete Farsi database for this project that is called SFAVD. It is a unique audio and visual database which in addition to considering Farsi conceptual and speech structure, it considers influence of speech on lip changes. This database is created for... 

    Designing a fuzzy logic controller for a quadruped robot using human expertise extraction

    , Article 2013 21st Iranian Conference on Electrical Engineering, ICEE 2013 ; 2013 , 14-16 May ; 9781467356343 (ISBN) Zand, R. M ; Shouraki, S. B ; Sharif University of Technology
    2013
    Abstract
    Many actions have been taken by researchers to design an appropriate controller for a quadruped robot. These efforts can be divided into two main categories: analytical and intelligent methods. The analytical method is based on the motion equations of the robot which are mostly complicated. These complication leads to difficulty in implementation. In contrast, there exists intelligent method which is based on the learning algorithms. Despite lots of improvements in the controlling of the quadruped robots, their ability of walking is still far less from the four legged animals' capability. Many researchers believe that four legged animals owe this priority to the learning attribute. Therefore... 

    Tissue growth into three-dimensional composite scaffolds with controlled micro-features and nanotopographical surfaces

    , Article Journal of Biomedical Materials Research - Part A ; Volume 101, Issue 10 , 2013 , Pages 2796-2807 ; 15493296 (ISSN) Tamjid, E ; Simchi, A ; Dunlop, J. W. C ; Fratzl, P ; Bagheri, R ; Vossoughi, M ; Sharif University of Technology
    2013
    Abstract
    Controlling topographic features at all length scales is of great importance for the interaction of cells with tissue regenerative materials. We utilized an indirect three-dimensional printing method to fabricate polymeric scaffolds with pre-defined and controlled external and internal architecture that had an interconnected structure with macro- (400-500 μm) and micro- (∼25 μm) porosity. Polycaprolactone (PCL) was used as model system to study the kinetics of tissue growth within porous scaffolds. The surface of the scaffolds was decorated with TiO2 and bioactive glass (BG) nanoparticles to the better match to nanoarchitecture of extracellular matrix (ECM). Micrometric BG particles were... 

    Optimal robust control of drug delivery in cancer chemotherapy: A comparison between three control approaches

    , Article Computer Methods and Programs in Biomedicine ; Volume 112, Issue 1 , 2013 , Pages 69-83 ; 01692607 (ISSN) Moradi, H ; Vossoughi, G ; Salarieh, H ; Sharif University of Technology
    2013
    Abstract
    During the drug delivery process in chemotherapy, both of the cancer cells and normal healthy cells may be killed. In this paper, three mathematical cell-kill models including log-kill hypothesis, Norton-Simon hypothesis and Emax hypothesis are considered. Three control approaches including optimal linear regulation, nonlinear optimal control based on variation of extremals and H∞-robust control based on μ-synthesis are developed. An appropriate cost function is defined such that the amount of required drug is minimized while the tumor volume is reduced. For the first time, performance of the system is investigated and compared for three control strategies; applied on three nonlinear models... 

    Discovering dominant pathways and signal-response relationships in signaling networks through nonparametric approaches

    , Article Genomics ; Volume 102, Issue 4 , October , 2013 , Pages 195-201 ; 08887543 (ISSN) Nassiri, I ; Masoudi Nejad, A ; Jalili, M ; Moeini, A ; Sharif University of Technology
    2013
    Abstract
    A signaling pathway is a sequence of proteins and passenger molecules that transmits information from the cell surface to target molecules. Understanding signal transduction process requires detailed description of the involved pathways. Several methods and tools resolved this problem by incorporating genomic and proteomic data. However, the difficulty of obtaining prior knowledge of complex signaling networks limited the applicability of these tools. In this study, based on the simulation of signal flow in signaling network, we introduce a method for determining dominant pathways and signal response to stimulations. The model uses topology-weighted transit compartment approach and comprises... 

    Preparation and evaluation of bioactive and compatible starch based superabsorbent for oral drug delivery systems

    , Article Journal of Drug Delivery Science and Technology ; Volume 23, Issue 5 , 2013 , Pages 511-517 ; 17732247 (ISSN) Pourjavadi, A ; Ebrahimi, A. A ; Barzegar, S ; Sharif University of Technology
    2013
    Abstract
    Novel types of highly swelling hydrogels (superabsorbent) were prepared by grafting crosslinked poly acrylic acid-co-2-hydroxyethylmetacrylate (PAA-co-HEMA) chains onto starch through a free radical polymerization method. The effect of grafting variables (i.e., concentration of methylenebisacrylamide (MBA), acrylic acid/2-hydroxy methymetacrylate (AA/HEMA) weight ratio, ammonium persulfate (APS), starch, neutralization percent, were systematically optimized to achieve a hydrogel with a maximum swelling capacity. The superabsorbent (SAP) formation was confirmed by Fourier transform infrared spectroscopy (FT-IR) and scanning electron microscopy (SEM). The controlled-release behavior of...