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    2D computational fluid dynamic modeling of human ventricle system based on fluid-solid interaction and pulsatile flow

    , Article Basic and Clinical Neuroscience ; Volume 4, Issue 1 , 2013 , Pages 64-75 ; 2008126X (ISSN) Masoumi, N ; Framanzad, F ; Zamanian, B ; Seddighi, A. S ; Moosavi, M. H ; Najarian, S ; Bastani, D ; Sharif University of Technology
    2013
    Abstract
    Many diseases are related to cerebrospinal fluid (CSF) hydrodynamics. Therefore, understanding the hydrodynamics of CSF flow and intracranial pressure is helpful for obtaining deeper knowledge of pathological processes and providing better treatments. Furthermore, engineering a reliable computational method is promising approach for fabricating in vitro models which is essential for inventing generic medicines. A Fluid-Solid Interaction (FSI)model was constructed to simulate CSF flow. An important problem in modeling the CSF flow is the diastolic back flow. In this article, using both rigid and flexible conditions for ventricular system allowed us to evaluate the effect of surrounding brain... 

    Application of NaYF4:Yb/Er/Tm UCNPs in Array-Based Sensing of Neurotransmitters: From a Single Particle to a Multichannel Sensor Array

    , Article ACS Applied Materials and Interfaces ; 2020 Abbasi Moayed, S ; Bigdeli, A ; Hormozi Nezhad, M. R ; Sharif University of Technology
    American Chemical Society  2020
    Abstract
    A novel multichannel sensor array has been designed using a single, yet multiemissive lanthanide-doped upconversion nanoparticle (UCNP). The energy levels of lanthanide ions gave rise to several emission bands which were exploited as individual sensor elements for the recognition of four important neurotransmitters (NTs): dopamine, norepinephrine, levodopa, and serotonin. At alkaline conditions, the oxidation products of these NTs quenched the fluorescence emissions of UCNPs with different quenching degrees. The resulting fingerprint multichannel emission profiles from NaYF4:Yb/Er/Tm UCNPs allowed the discrimination of NTs with excellent accuracy. The recognition was further verified in... 

    Anisotropic finite element modelling of traumatic brain injury: A voxel-based approach

    , Article Scientia Iranica ; Volume 28, Issue 3 B , 2021 , Pages 1271-1283 ; 10263098 (ISSN) Hoursan, H ; Farahmand, F ; Ahmadian, M. T ; Masjoodi, S ; Sharif University of Technology
    Sharif University of Technology  2021
    Abstract
    A computationally efficient 3D human head finite element model was constructed. The model includes the mesoscale geometrical details of the brain including the distinction between white and grey matter, sulci and gyri, the ventricular system, foramen magnum, and cerebrospinal fluid. The heterogeneity and anisotropy from diffusion tensor imaging data were incorporated by applying a one-to-one voxel-based correspondence between diffusion voxels and finite elements. The voxel resolution of the model was optimized to obtain a trade-off between reduced computational cost and higher geometrical details. Three sets of constitutive material properties were extracted from the literature to validate... 

    Mathematical modeling of CSF pulsatile hydrodynamics based on fluid-solid interaction

    , Article IEEE Transactions on Biomedical Engineering ; Volume 57, Issue 6 , 2010 , Pages 1255-1263 ; 00189294 (ISSN) Masoumi, N ; Bastani, D ; Najarian, S ; Ganji, F ; Farmanzad, F ; Seddighi, A. S ; Sharif University of Technology
    2010
    Abstract
    Intracranial pressure (ICP) is derived from cerebral blood pressure and cerebrospinal fluid (CSF) circulatory dynamics and can be affected in the course of many diseases. Computer analysis of the ICP time pattern plays a crucial role in the diagnosis and treatment of those diseases. This study proposes the application of Linninger et al.s [IEEE Trans. Biomed. Eng. , vol. 52, no. 4, pp. 557565, Apr. 2005] fluidsolid interaction model of CSF hydrodynamic in ventricular system based on our clinical data from a group of patients with brain parenchyma tumor. The clinical experiments include the arterial blood pressure (ABP), venous blood pressure, and ICP in the subarachnoid space (SAS). These... 

    Neural network-based brain tissue segmentation in MR images using extracted features from intraframe coding in H.264

    , Article Proceedings of SPIE - The International Society for Optical Engineering, 9 December 2011 through 10 December 2011, Singapore ; Volume 8349 , December , 2012 ; 0277786X (ISSN) ; 9780819490254 (ISBN) Jafari, M ; Kasaei, S ; Sharif University of Technology
    Abstract
    Automatic brain tissue segmentation is a crucial task in diagnosis and treatment of medical images. This paper presents a new algorithm to segment different brain tissues, such as white matter (WM), gray matter (GM), cerebral spinal fluid (CSF), background (BKG), and tumor tissues. The proposed technique uses the modified intraframe coding yielded from H.264/(AVC), for feature extraction. Extracted features are then imposed to an artificial back propagation neural network (BPN) classifier to assign each block to its appropriate class. Since the newest coding standard, H.264/AVC, has the highest compression ratio, it decreases the dimension of extracted features and thus yields to a more... 

    Recent advances in the design and applications of amyloid-β peptide aggregation inhibitors for Alzheimer’s disease therapy

    , Article Biophysical Reviews ; Volume 11, Issue 6 , 2019 , Pages 901-925 ; 18672450 (ISSN) Jokar, S ; Khazaei, S ; Behnammanesh, H ; Shamloo, A ; Erfani, M ; Beiki, D ; Bavi, O ; Sharif University of Technology
    Springer  2019
    Abstract
    Alzheimer’s disease (AD) is an irreversible neurological disorder that progresses gradually and can cause severe cognitive and behavioral impairments. This disease is currently considered a social and economic incurable issue due to its complicated and multifactorial characteristics. Despite decades of extensive research, we still lack definitive AD diagnostic and effective therapeutic tools. Consequently, one of the most challenging subjects in modern medicine is the need for the development of new strategies for the treatment of AD. A large body of evidence indicates that amyloid-β (Aβ) peptide fibrillation plays a key role in the onset and progression of AD. Recent studies have reported...