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aptasensor
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Predicting the cardiac troponin I (cTnI) aptamer/methylene blue configuration using computational modeling studies: a screening search method for constructing aptasensors
, Article ChemistrySelect ; Volume 5, Issue 35 , September , 2020 , Pages 10958-10969 ; Khajehsharifi, H ; Hashemnia, S ; Shahrokhian, S ; Sharif University of Technology
Wiley-Blackwell
2020
Abstract
Acute Myocardial Infarction (AMI) is the most common cause of mortality, and cardiac troponin I (cTnI) is the gold standard for AMI diagnosis. Some aptamers have been reported to detect cTnI, but there is rarely any structural information on their binding with cTnI. There are many studies involving electrochemical aptasensors with methylene blue (MB) as a redox indicator that does not provide any significant new information. Our study, however, involves the computational modeling of the complexes of a documented 40-mer ssDNA-cTnI aptamer with its target and MB. Here, MB was used as a model system to investigate the rather complex interaction modes between small redox molecules and a...
Nanoporous gold as a suitable substrate for preparation of a new sensitive electrochemical aptasensor for detection of salmonella typhimurium
, Article Sensors and Actuators, B: Chemical ; Volume 255 , 2018 , Pages 1536-1544 ; 09254005 (ISSN) ; Shahrokhian, S ; Nurmohammadi, F ; Sharif University of Technology
Elsevier B.V
2018
Abstract
Nowadays, achievement to easy, fast, reliable and cost-effective techniques and tools is one of the most important challenges in detection of microorganisms. Salmonella typhimurium is one of the most important pathogenic bacteria that affect the human health and environmental infections. In this work we report a new, stable, biocompatible and cost-effective platform for construction of an aptasensor based on nanoporous gold (NPG) for detection of S. typhimurium. Nanoporous gold is electrochemically synthesized using Au-Cu alloy at the surface of Au/GCE. Thiol functionalized aptamer is used for effective linking to the surface of NPG/Au/GCE via self-assemble monolayers (SAMs) formation....
Design and fabrication of an electrochemical aptasensor using Au nanoparticles/carbon nanoparticles/cellulose nanofibers nanocomposite for rapid and sensitive detection of Staphylococcus aureus
, Article Bioelectrochemistry ; Volume 123 , 2018 , Pages 70-76 ; 15675394 (ISSN) ; Shahrokhian, S ; Sharif University of Technology
Elsevier B.V
2018
Abstract
Since that pathogenic bacteria are major threats to human health, this paper describes the fabrication of an effective and durable sensing platform based on gold nanoparticles/carbon nanoparticles/cellulose nanofibers nanocomposite (AuNPs/CNPs/CNFs) at the surface of glassy carbon electrode for sensitive and selective detection of Staphylococcus aureus (S. aureus). The AuNPs/CNPs/CNFs nanocomposite with the high surface area, excellent conductivity, and good biocompatibility was used for self-assembled of the thiolated specific S. aureus aptamer as a sensing element. The surface morphology of AuNPs/CNPs/CNFs nanocomposite was characterized with field emission scanning electron microscopy...