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    Modeling the Brain’s Probabilistic Prediction of Oddball Paradigm

    , Ph.D. Dissertation Sharif University of Technology Mousavi, Zahra (Author) ; Karbalai Aghajan, Hamid (Supervisor)
    Abstract
    The brain is constantly anticipating the future of sensory inputs based on past experiences. When new sensory data is different from predictions shaped by recent trends, neural signals are generated to report this surprise. Surprise leads to garnering attention, causes arousal, and motivates engagement. It motivates the formation of an explanation or updating of current models. Three models have been proposed for quantifying surprise as the Shannon, Bayesian, and confidence-corrected surprises. In this thesis, we analyze EEG and MEG signals recorded during oddball tasks to examine and statistically compare the value of temporal/ spatial components in decoding the brain’s surprise. We... 

    Analysis of Functional Brain Connectivity Using EEG Signals for Classification of Brain States

    , M.Sc. Thesis Sharif University of Technology Ghodsi, Saeed (Author) ; Karbalai Aghajan, Hamid (Supervisor) ; Mohamadzadeh, Hoda ($item.subfieldsMap.e)
    Abstract
    Different perceptual, cognitive, and emotional situations results in a kind of information flow in the brain by means of coordinated neuronal oscillations. Analysing these oscillations, especially synchronizations of different brain regions, can illustrate the brain response to the aforementioned situations. In the literature, connectivity between brain regions is divided into the three groups of structural, effective, and functional, s.t. the first one referes to the connectivity between nearby regions, while the second and third ones focus on the synchronization of oscillations of arbitrary located regions. Although EEG is not the best choice for analyzing functional connectivity between... 

    Investigation of Brain Connectivity Changes during Seizure using Graph Theory

    , M.Sc. Thesis Sharif University of Technology Khoshkhah Tinat, Atefeh (Author) ; Karbalai Aghajan, Hamid (Supervisor) ; Mohammadzadeh, Hoda (Co-Supervisor)
    Abstract
    Epilepsy is a chronic neurological disorder characterized by recurrent and abrupt seizures. Seizures occur due to disturbances in the interactions between the distributed neuronal populations in the brain. Investigation of the brain functional connectivity networks is a way to better understand how the brain functions during seizure. To estimate the brain functional connectivity network, we need criteria that can estimate the functional connections between the brain regions from the recorded brain functional data such as electroencephalogram (EEG) signals. After estimating the functional brain connectivity networks, it is possible to create graphs corresponding to these estimated networks... 

    Comparative Analysis of the Effect of Gamma-band Entrainment through Auditory Stimulation in AD Patients and Healthy Controls

    , M.Sc. Thesis Sharif University of Technology Lahijanian, Mojtaba (Author) ; Aghajan, Hamid (Supervisor)
    Abstract
    As the most widespread form of mental disorders, Alzheimer’s disease (AD) remains among the main challenges in neurology and in the field of neuroscience. There are still no effective drugs to cure this disease or slow its progress, and prevention methods are still not even close to having established records. However, the onset of AD has been linked to certain dysfunctions of the oscillatory frequencies of the affected brain mainly in the gamma band. Hence, an approach to consider for reversing the damaging effects of AD could involve reviving such oscillations through stimulating the neuronal networks in the brain that are known to be the source of these oscillations. A recent research has... 

    Speech-Driven Facial Reenactment

    , M.Sc. Thesis Sharif University of Technology Jalalifar, Ali (Author) ; Karbalaei Aghajan, Hamid (Supervisor)
    Abstract
    Creating talking heads from audio input is interesting from both scientific and practical viewpoints, e.g. constructing virtual computer generated characters, aiding hearing-impaired people, live dubbing of videos with translated audio, etc. Due to its wide variety of applications, audio to video has been the focus of intensive research in recent years. Mapping audio to facial images with accurate lip-sync is an extremely difficult task because it is a mapping form 2-Dimensional to 3-Dimensional space and also because humans are expert at detecting any out-of-sync lip movements with respect to an audio.Approaches to automatically generating natural looking speech animation usually involve... 

    A Novel Approach for Seizure Prediction using EEG Signals

    , M.Sc. Thesis Sharif University of Technology Shahbazi, Mohammad (Author) ; Karbalaei Aghajan, Hamid (Supervisor)
    Abstract
    As the fourth most common neurological disorder, epilepsy affects lots of people all around the world, some of whom have to live with unpredictable seizures uncontrollable by surgery or medication. Hence, Developing systems for detection and prediction of the epileptic seizures will help the patients to avoid the possible damages caused by sudden seizures. This study addresses the task of epileptic seizure prediction, using three different novel approaches. The first approach, which is based on anomaly detection, contains three steps: feature extraction from EEG signals, training a one-class SVM classifier, and a post-processing step. The second method exploits a recurrent neural network to... 

    Capacitive Sensors for user Gesture Recognition in Smart Environments

    , M.Sc. Thesis Sharif University of Technology Rezaei Shahmirzadi, Aein (Author) ; Karbalaee Aghajan, Hamid (Supervisor)
    Abstract
    To create applications for smart environments we can select from a huge variety of sensors that measure environmental parameters within the premises. Capacitive proximity sensors use weak electric fields to recognize conductive objects, such as the human body. They can be unobtrusively applied or even provide information when hidden from view which make these sensor more popular. Furthermore, these sensors are low cost, precise and low power. In this thesis, we study the construction and operation of capacitive sensors and the challenges of using them. Then we use them to produce smart devices. Smart flooring is used on the ground and it can be used to track people or fall detection. Smart... 

    Differences of the Brain’s Surprise Response Due to the Habituation Effect in Neurodegenerative Patients and Healthy People

    , M.Sc. Thesis Sharif University of Technology Hosseinpour Khaledian, Kamyab (Author) ; Karbalaei Aghajan, Hamid (Supervisor)
    Abstract
    The brain is constantly placed in stochastic environments. This leads to the brain developing a probabilistic model for the environment. However, sometimes unexpected events occur that lead to surprise and a need for updating the probabilistic model. It can be concluded from this argument that reduction in brian’s surprise is a sign of learning. On the other hand, a probability distribution obtained from a probabilistic model contains an amount of uncertainty. Reducing this uncertainty can also be considered a sign of learning. Surprise and uncertainty can be obtained from a probability distribution using information theory concepts. Another important issue in learning is habituation, which... 

    Effects of 40Hz Auditory Entrainment on Phase-Amplitude Coupling and Connectivity Parameters of the Brain

    , M.Sc. Thesis Sharif University of Technology Eshaghi, Amir Masoud (Author) ; Karbalaei Aghajan, Hamid (Supervisor)
    Abstract
    Alzheimer's disease is the most common type of dementia, which has been recognized as the seventh most common fatal disease in the elderly over 65 years of age. Despite all the research done to recognize and treat this disease, so far there is no cure for this disease, and even most of the chemical treatments that are prescribed for Alzheimer's patients are only effective towards reducing the symptoms of this disease and lose their effectiveness as it progresses. Therefore, in the last two decades, in order to find a way to better understand and even treat AD, scientists have reached a concept called brain frequency stimulation, which can improve people's cognitive performance without the... 

    Probabilistic Modelling of Fatigue Detection with Facial Features

    , M.Sc. Thesis Sharif University of Technology Gholamipour Fard, Rahil (Author) ; karbalaie Aghajan, Hamid (Supervisor)
    Abstract
    Today, everyone is looking for ways to achieve comfort and safety in the workplace and, in so doing, appeals to various sciences. One of these sciences is "ergonomics", which examines the human relationship with the work. One of the areas that could be of great interest is the driving ergonomics. After all nowadays, many people use personal vehicles. The increasing use of personal vehicles has increased the number of accidents and deaths. In recent decades, many researches have been done in the field of driver fatigue detection. To avoid road accidents, researchers have focused on monitoring driver and vehicle behavior and tried to analyse status of the driver. Using computer vision, we can... 

    Reconstruction of Visual Experience from Brain’s Visual Cortex Data Using
    Deep Learning

    , M.Sc. Thesis Sharif University of Technology (Author) ; Karbalaee Aghajan, Hamid (Supervisor) ; Soleymani, Mahdieh (Co-Supervisor)
    Abstract
    e study of the brain’s neural activity is an active research area in computational neuroscience aiming to provide insights about the functionality of the brain as well as dysfunctions that underlie disorders. Functional Magnetic Resonance Imaging (fMRI) plays an important role in brain studies by providing non-invasive records of neural activities during a specific task with location sensitivity. Recent advances in statistics and machine learning offer powerful tools for paern recognition and processing of fMRI data. In this thesis, we decode information recorded via fMRI from the visual cortex to reconstruct images presented to subjects. Current reconstruction methods face numerous... 

    Study of Brain Oddball Response to Olfactory Stimuli as Indicator in Dementia Disorders

    , M.Sc. Thesis Sharif University of Technology Sedghizadeh, Mohammad Javad (Author) ; Karbalaee Aghajan, Hamid (Supervisor)
    Abstract
    High-frequency oscillations of the frontal cortex are involved in functions of the brain that fuse processed data from different sensory modules or bind them with elements stored in the memory. These oscillations also provide inhibitory connections to neural circuits that perform lower-level processes. Deficit in the performance of these oscillations has been examined as a marker for Alzheimer’s disease (AD). Additionally, the neurodegenerative processes associated with AD, such as the deposition of amyloid-beta plaques, do not occur in a spatially homogeneous fashion and progress more prominently in the medial temporal lobe in the early stages of the disease. This region of the brain... 

    Determination of Correlation between Phase Amplitude Coupling and Surprise in Brain

    , M.Sc. Thesis Sharif University of Technology Heidari Beni, Mohammad Hossein (Author) ; Karblaei Aghajan, Hamid (Supervisor)
    Abstract
    The human brain needs to create a model of data surrounding it continuously. To do so, handling the dynamics of information through communication between the brain regions is a critical step. Having a model of this procedure in the brain not only provides a clear explanation of how cognition occurs in the brain, but also enables us to have a better view of the cognition impairments in the brain. Surprise is a process in the brain that brings various cognitive abilities, including attention and memory, into practical use. Furthermore, these abilities are about manipulating the input information in an optimized way. Memory is the ability to store information arriving at a specific time.... 

    Multi-Camera Action Recognition with Manifold Learning

    , M.Sc. Thesis Sharif University of Technology Rezaee Taghiabadi, Mohammad Mehdi (Author) ; Karbalaee Aghajan, Hamid (Supervisor)
    Abstract
    Human action recognition is one of the most attended topics in computer vision and robotics.One of the flavors of this problem relates to the situation in which the task of action recognition is carried out by data from several cameras. Different approaches have been proposed for combining information. Various reduction methods have been introduced to decrease the processing load. All of the methods in this particular field of study can be divided into two linear and non-linear methods. In the linear methods, we don’t pay attention to the non-linear structure of the data, and these kind of approaches are not reliable. Furthermore, combining different actions data is done before the dimension... 

    Alzheimer’s Disease Diagnosis using Description Test

    , M.Sc. Thesis Sharif University of Technology Roshanzamir, Alireza (Author) ; Soleymani Baghshah, Mahdieh (Supervisor) ; Karbalaei Aghajan, Hamid (Supervisor)
    Abstract
    There are currently about 50 million people with Alzheimer's disease in the world, and this number is about 700 thousand in Iran. The symptoms of the disease include decreased awareness, disinterest in unfamiliar subjects, increased distraction, speech problems, and etc. which gradually leads to an absolute inability to perform daily activities and completely mute. The disease belongs to the category of neurological disorders and is the most common type of dementia for which no treatment has been offered so far. However, if the disease is diagnosed in its early stage, a series of pharmacological and behavioral therapy approaches can be prescribed to reduce the pace or progression of the... 

    , M.Sc. Thesis Sharif University of Technology karbalai Ghareh, Alireza (Author) ; Nasiri Kenari, Masoumeh (Supervisor)
    Abstract
    In the recent years, the cooperative communications based on Network Coding have received significant attentions to simultaneously improve the diversity order and the network throughput. In this thesis, a new cooperative transmission scheme for the cooperative relay-based networks called “Convolutional Network-Coded Cooperation” (CNCC) is proposed, in which a systematic convolutional code is used in the network level. In this scheme, the systematic packets are directly transmitted by the sources, and the parity packets, calculated based on the received sources’ packets, are transmitted by the relays. The proposed CNCC scheme is considered in the cooperative networks including N sources, M... 

    A Practical Subject-specific FE Model of Human Knee Joint for Pre-planning of Tibial Osteotomy Surgery

    , M.Sc. Thesis Sharif University of Technology Ali Aghajan, Majid (Author) ; Farahmand, Farzam (Supervisor)
    Abstract
    Knee joint simulation to analyze the process of osteotomy surgery has been studied in several researches and its effectiveness has been shown. However, these models include many components and details that impose significant time and cost on the patient due to the need for multiple data as well as extensive specialized activity to build and analyze the model. Thus, this study aims to provide a practical finite-element patient-specific model for predicting the outcome and planning of knee osteotomy surgery, such a way that it can be made and processed with little data and in a short time, and also requires little specialized activity. For this purpose, first, a detailed model of the knee... 

    Decoding olfactory stimuli in EEG data using nonlinear features: A pilot study

    , Article Journal of Neuroscience Methods ; Volume 341 , 2020 Ezzatdoost, K ; Hojjati, H ; Aghajan, H ; Sharif University of Technology
    Elsevier B.V  2020
    Abstract
    Background: While decoding visual and auditory stimuli using recorded EEG signals has enjoyed significant attention in the past decades, decoding olfactory sensory input from EEG data remains a novelty. Recent interest in the brain's mechanisms of processing olfactory stimuli partly stems from the association of the olfactory system and its deficit with neurodegenerative diseases. New Methods: An olfactory stimulus decoder using features that represent nonlinear behavior content in the recorded EEG data has been introduced for classifying 4 olfactory stimuli in 5 healthy male subjects. Results: We show that by using nonlinear and chaotic features, a subject-specific classifier can be... 

    Human detection in occluded scenes through optically inspired multi-camera image fusion

    , Article Journal of the Optical Society of America A: Optics and Image Science, and Vision ; Volume 34, Issue 6 , 2017 , Pages 856-869 ; 10847529 (ISSN) Ghaneizad, M ; Kavehvash, Z ; Aghajan, H ; Sharif University of Technology
    2017
    Abstract
    In this paper, a novel approach for foreground extraction has been proposed based on a popular three-dimensional imaging technique in optics, called integral imaging. In this approach, multiple viewpoint images captured from a three-dimensional scene are used to extract range information of the scene and effectively extract an object or a person, even in the presence of heavy occlusion. The algorithm consists of two parts: depth estimation and reconstruction of the targeted object at the estimated depth distance. Further processing of the resulting reconstructed image can lead to the detection of a face or a pedestrian in the scene, which may not otherwise be detectable due to partial... 

    Trial-by-trial surprise-decoding model for visual and auditory binary oddball tasks

    , Article NeuroImage ; Volume 196 , 2019 , Pages 302-317 ; 10538119 (ISSN) Modirshanechi, A ; Kiani, M. M ; Aghajan, H ; Sharif University of Technology
    Academic Press Inc  2019
    Abstract
    Having to survive in a continuously changing environment has driven the human brain to actively predict the future state of its surroundings. Oddball tasks are specific types of experiments in which this nature of the human brain is studied. Detailed mathematical models have been constructed to explain the brain's perception in these tasks. These models consider a subject as an ideal observer who abstracts a hypothesis from the previous stimuli, and estimates its hyper-parameters - in order to make the next prediction. The corresponding prediction error is assumed to manifest the subjective surprise of the brain. While the approach of earlier works to this problem has been to suggest an...