Sharif Digital Repository

During all operations in hydrocarbon reservoirs, there is a possibility of formation damage. These damages can reduce the production of fluids from reservoir. One of the major damages that can seriously affect the performance of a reservoir is the damage caused by drilling fluid. The main purpose of this research is to study the main mechanisms of formation damages when using oil-based drilling fluids and fixing or preventing these damages. Once the mechanisms are identified, it is tried to cure the damages but without acid-washing. The alternative method is surfactant-washing which is a surfactant-brine injection. This injection has been done for the first time. This study helps to industry... 

Nowadays, one of the most major problems in drilling industry is Lost Circulation in different formations. Lost Circulation increases non-productive time, expenditures and environmental damages. Lost Circulation can happen in natural or induced fractures, cavernous formations and high permeable rocks and it can be subcategorized in seepage, medium, severe or complete type based on the severity of the problem. For addressing this issue, different methods are suggested. One of the most considered of these methods is using Lost Circulation Materials (LCM). In this thesis, it was tried to manage the situation with Designing and engineering of lost circulation materials for different lost... 

One of the most important challenges in drilling horizontal and directional wells is the optimization of hydraulics and hole cleaning and ECD management. In these wells, poor hole cleaning can lead to formation of cutting bed on the low side of the annulus and cause problems such as stuck pipe or increase in torque and drag. Also poor hydraulic design can lead to decrease in rate of penetration and thus, increase in costs. Mud weight should be placed inside the range of mud window (more than pore pressure and less than formation fracture pressure) in order to prevent kick of reservoir fluid or mud loss.In this thesis, the main goal is to optimize hydraulics and hole cleaning and manage ECD... 

The application of biocatalysts in organic reactions refers to the use of enzymes, purified or crude, to increase the reaction rate. The usage of biocatalysts in organic reactions have many advantages, including biocompatibility, ease of separation, high yield, reusability without losing activity, high selectivity, and the use of water as the solvent. Furthermore, the carbon–carbon bond formation is one of the most important reactions in the synthesis of organic compounds, drugs, and biomolecules. Using enzymes in organic reactions can provide insightful information about the enzymes catalytic activities and paves the way for systematic investigation of their mechanisms. The enzymes... 

In this research, an optical processing method for DNA classification is presented in order to overcome the problems in the previous methods. With improving in the operational capacity of the sequencing process, which has increased the number of genomes, comparing sequences with a complete database of genomes is a serious challenge to computational methods. Most current classification programs suffer from either slow classification speeds, large memory requirements, or both. To achieve high speed and accuracy at the same time, we suggest using optical processing methods. The performance of electronic processing-based computing, especially in the case of large data processing, is usually... 

At the molecular level, proteins control almost all the biochemical reactions in the cells. In order for proteins to function, they must be able to fold into their unique 3D structure. Deformation of protein structure due to some environmental phenomena such as pH, high temperature, and stress may cause unfolding of proteins and finally result in formation of protein fibrils called "amyloid". Amyloid has been found in a number of human diseases such as Alzheimer, type II diabetes, and Parkinson. Recently pyridazine has been under spotlight due to its unique chemical properties such as high dipole moment and higher solubility in biological solvents. In this study, we aim at using a... 

One of the most challengeable topic in the field of green chemistry is the synthesis of organic structure in water. In this project immobilized glucose on Fe3O4 was prepared as a nano heterogeneous dispersive catalyst in water. The catalyst was fully characterized by FT-IR, TGA, CHN, SEM, EDX and atomic absorption spectroscopy. The synthesized catalyst was used in the synthesis of different derivatives of 1,2,3-triazole via one-pot three component reaction of alkynes, alkyl halides, sodium azides; And to the best of our knowledge this novel catalyst coin sides to the principles of green chemistry. This nano catalyst can be recycled and reused for several runs without significant loss of its... 

Bioorthogonal chemistry defines any reaction, inside or outside the living systems, without interfering with native chemical processes and 3dimensional structure of proteins. In these types of reactions water is the sole solvent; a neutral pH is required; the temperature must be up to 40 oC. The kinetics of reactions must be on the hour scale and the nontoxic reagents with low concentration must be used. One of the simplest methods of visualizing protein molecule is covalent attachment of fluorescein to protein. In this work several fluorescent compounds were synthesized. These novel compounds include acylchloride fluorescein, N-hydroxysuccinimide fluorescein, thiophenol fluorescein, and... 

The most important factor in protein's function and its 3D structure is folding. Misfolding or native folding perturbation in some peptides and proteins force them get into amyloid fibril aggregation. It has been observed that these aggregations are the cause of some debilitative diseases especially ones that are related to aging like Alzheimer disease, Hantington's disease, typeII diabets etc. Recently it has been shown that specific regions in human catalase protein interact with some amyloid fibrils, such as Aß, IAPP, PrP etc. Inteins are self-splicing protein enzymes, which excise themselves from the mature protein and join the two flanking adjacent sequences by a new peptide bond in a...